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@FBK-NILab

NILab Neuroinformatics Laboratory

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  1. DecMeg2014 DecMeg2014 Public

    Official Repository of the code associated with the data analysis competition DecMeg2014

    Python 26 31

  2. HCP-Tractography HCP-Tractography Public

    Dipy pipeline for reconstruction and tracking of tractography from Human Connectome Project dataset

    Python 10 10

  3. tractome tractome Public

    Tractome is an interactive 3D tool for exploration and segmentation of tractography data.

    Python 7 5

  4. app-classifyber app-classifyber Public

    Forked from giulia-berto/app-classifyber

    Linear classification of single streamlines.

    Python 7 2

  5. verifyber verifyber Public

    An extended edge convolution model for tractography

    Python 5 2

  6. NeuroBox NeuroBox Public

    A OwnCloud Plugin to manage data analysis on remote high performance computing infrastructure.

    2 4

Repositories

Showing 10 of 35 repositories
  • FBK-NILab.github.io Public

    Website of Neuroinformatics Laboratory at Fondazione Bruno Kessler and University of Trento

    FBK-NILab/FBK-NILab.github.io’s past year of commit activity
    SCSS 0 0 0 0 Updated Feb 11, 2025
  • bl_app_dbb_DisSeg Public Forked from gamorosino/bl_app_dbb_DisSeg

    Deep Learning based segmentation for distorted brains

    FBK-NILab/bl_app_dbb_DisSeg’s past year of commit activity
    Python 1 1 0 0 Updated Jun 18, 2024
  • verifyber Public

    An extended edge convolution model for tractography

    FBK-NILab/verifyber’s past year of commit activity
    Python 5 2 0 0 Updated Apr 30, 2024
  • intraopmap Public

    Integrating direct brain stimulation with rsfMRI and tractography data

    FBK-NILab/intraopmap’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 28, 2023
  • app-classifyber-segmentation Public

    Code to run Classifyber as a pre-trained bundle segmentation method.

    FBK-NILab/app-classifyber-segmentation’s past year of commit activity
    Python 1 MIT 1 1 0 Updated Dec 26, 2023
  • TractSeg-BrainLife Public Forked from MIC-DKFZ/TractSeg

    Automatic White Matter Bundle Segmentation

    FBK-NILab/TractSeg-BrainLife’s past year of commit activity
    Python 0 Apache-2.0 74 0 0 Updated Nov 6, 2023
  • tractogram_filtering Public

    Filtering out of artifactual streamlines from a tractogram with a geometric deep learning model

    FBK-NILab/tractogram_filtering’s past year of commit activity
    Jupyter Notebook 2 1 2 0 Updated May 3, 2023
  • Dataset2BIDS Public

    Tool for converting DICOM folders to a standard BIDS format dataset, with extra options for longitudinal pre-/post-surgical MRI data.

    FBK-NILab/Dataset2BIDS’s past year of commit activity
    Shell 0 0 0 0 Updated Jan 17, 2023
  • bl_app_dbb_DiceScore Public Forked from gamorosino/bl_app_dbb_DiceScore

    Tool that performs the dice score between two 3D segmentations

    FBK-NILab/bl_app_dbb_DiceScore’s past year of commit activity
    Python 0 1 0 0 Updated Jul 17, 2022
  • bl_app_dbb_ANTsCTSeg Public Forked from gamorosino/bl_app_dbb_ANTsCTSeg

    A tool that performs the antsCorticalThickness.sh script on a T1-w image using PTBP priors in order to obtain the brain tissue segmentation.

    FBK-NILab/bl_app_dbb_ANTsCTSeg’s past year of commit activity
    Shell 0 1 0 0 Updated Jul 17, 2022
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