Update dependencies

FNNDSC · May 27, 2022 · d62894f · d62894f
1 parent 514811e
commit d62894f
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Showing 4 changed files with 4 additions and 4 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -1,4 +1,4 @@
-FROM docker.io/fnndsc/mni-conda-base:civet2.1.1-python3.10.2
+FROM docker.io/fnndsc/mni-conda-base:civet2.1.1-python3.10.4
 
 LABEL org.opencontainers.image.authors="FNNDSC <dev@babyMRI.org>" \
       org.opencontainers.image.title="sphere_mesh ChRIS plugin wrapper"

diff --git a/requirements.txt b/requirements.txt
@@ -1,3 +1,3 @@
-chris_plugin~=0.0.10
+chris_plugin==0.0.17
 pycivet==0.0.2a1
 loguru~=0.6.0
diff --git a/setup.py b/setup.py
@@ -2,7 +2,7 @@
 
 setup(
     name             = 'ep-sphere_mesh',
-    version          = '0.0.2',
+    version          = '0.0.3',
     description      = 'A ChRIS ds plugin wrapper for sphere_mesh',
     author           = 'Jennings Zhang',
     author_email     = 'Jennings.Zhang@childrens.harvard.edu',

diff --git a/sphere_mesh_wrapper.py b/sphere_mesh_wrapper.py
@@ -76,7 +76,7 @@ def main(options: Namespace, inputdir: Path, outputdir: Path):
 
     results = []
     with ThreadPoolExecutor(max_workers=len(os.sched_getaffinity(0))) as pool:
-        mapper = PathMapper(inputdir, outputdir, glob=options.pattern, suffix='.obj')
+        mapper = PathMapper.file_mapper(inputdir, outputdir, glob=options.pattern, suffix='.obj')
         for mnc, obj in mapper:
             results.append(pool.submit(sphere_mesh_wrapper, mnc, obj, options.side))