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@GMOD

Generic Model Organism Database Project

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  1. Chado Chado Public

    the GMOD database schema

    PLpgSQL 41 23

  2. jbrowse-components jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    TypeScript 235 67

  3. jbrowse jbrowse Public

    JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

    JavaScript 469 199

  4. Apollo Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    Groovy 132 85

Repositories

Showing 10 of 104 repositories
  • jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    GMOD/jbrowse-components’s past year of commit activity
    TypeScript 235 Apache-2.0 67 270 (3 issues need help) 25 Updated May 10, 2025
  • Apollo3 Public

    JBrowse 2 plugin for editing annotations on an Apollo server

    GMOD/Apollo3’s past year of commit activity
    TypeScript 11 Apache-2.0 4 64 7 Updated May 9, 2025
  • jbrowse-plugin-msaview Public

    multiple sequence alignment browser plugin for JBrowse 2

    GMOD/jbrowse-plugin-msaview’s past year of commit activity
    TypeScript 5 Apache-2.0 0 5 0 Updated May 6, 2025
  • jbrowse-plugin-protein3d Public

    3D protein structure visualizer in jbrowse 2 - WIP

    GMOD/jbrowse-plugin-protein3d’s past year of commit activity
    TypeScript 0 0 1 1 Updated May 6, 2025
  • react-msaview Public

    A multiple sequence alignment viewer

    GMOD/react-msaview’s past year of commit activity
    TypeScript 21 MIT 2 25 0 Updated May 5, 2025
  • Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    GMOD/Apollo’s past year of commit activity
    Groovy 132 85 240 (5 issues need help) 1 Updated May 2, 2025
  • genomefeatures Public

    A D3 renderer for gene and variant features

    GMOD/genomefeatures’s past year of commit activity
    TypeScript 0 0 6 0 Updated May 1, 2025
  • vcf-js Public

    High performance Variant Call Format (VCF) parser in pure JavaScript

    GMOD/vcf-js’s past year of commit activity
    TypeScript 24 MIT 5 2 1 Updated Apr 30, 2025
  • cram-js Public

    Read CRAM v3 and v2 in node or in the browser

    GMOD/cram-js’s past year of commit activity
    TypeScript 18 MIT 9 8 1 Updated Apr 30, 2025
  • generic-filehandle2 Public

    modernization of the original generic-filehandle, no Buffer polyfill needed

    GMOD/generic-filehandle2’s past year of commit activity
    TypeScript 0 0 0 0 Updated Apr 30, 2025
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