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Issues: GreenleafLab/ArchR
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Some quesetion about Cluster Identity
bug
Something isn't working
#2253
opened Jan 14, 2025 by
superSXB
Genes annotation ranges tampered after project creation
bug
Something isn't working
#2252
opened Jan 8, 2025 by
Baboon61
heatmapCodex
: ERROR while rich displaying an object: Error in grid.Call.graphics(C_downvppath, name$path, name$name, strict): Viewport 'Norm. Enrichment -log10(P-adj) [0-Max]_heatmap_body_1_1' was not found
bug
#2250
opened Dec 29, 2024 by
danli349
AddDoubletScores makes Rstudio aborted?
bug
Something isn't working
#2247
opened Dec 17, 2024 by
joeyQX
Error in H5Fopen(file, flags = flags, fapl = fapl, native = native) : HDF5. File accessibility. Unable to open file.
bug
Something isn't working
#2245
opened Dec 6, 2024 by
IqRaZaFaR16
Stuck at getImputeWeights(proj) in tutorial
bug
Something isn't working
#2244
opened Nov 29, 2024 by
mohsinbadat
Error while creating arrow files with no specific (informative) error message
bug
Something isn't working
#2232
opened Nov 13, 2024 by
drowsygoat
GeneAnnotation & Cis-BP references need to be updated
bug
Something isn't working
#2228
opened Nov 1, 2024 by
dannyconrad
Troubles in the tutorial with rank plots labels
bug
Something isn't working
#2227
opened Oct 25, 2024 by
alekseybelikov
Troubles in the tutorial with plotEnrichHeatmap followed by ComplexHeatmap::draw
bug
Something isn't working
#2226
opened Oct 25, 2024 by
alekseybelikov
Error in tutorial trajectory analysis
bug
Something isn't working
#2225
opened Oct 25, 2024 by
alekseybelikov
AddDoubletScore - TileMatrix/chr5/rowSums does not exist
bug
Something isn't working
#2224
opened Oct 23, 2024 by
shamer3
problem in creating Arrow Files from Bam file
bug
Something isn't working
#2223
opened Oct 22, 2024 by
zara03
Peak marker heatmap not sorted
bug
Something isn't working
#2222
opened Oct 22, 2024 by
alekseybelikov
Can't install the ArchR on MacOS 15.0.1
bug
Something isn't working
#2221
opened Oct 20, 2024 by
penghy27
addGeneExpressionMatrix
Error: invalid subscript
bug
#2219
opened Oct 17, 2024 by
danli349
Problem with addMonocleTrajectory( ArchRProj = NULL, name = "Trajectory", useGroups = NULL, groupBy = "Clusters", monocleCDS = NULL, force = FALSE )
bug
Something isn't working
#2217
opened Oct 12, 2024 by
A-legac45
plotMarkerHeatmap: nLabel = 0 will result in an error
bug
Something isn't working
#2216
opened Oct 12, 2024 by
huyulan-funan
addGeneIntegrationMatrix
Error in slot(object = object, name = "features")[[layer]] <- features: more elements supplied than there are to replace Traceback:
bug
#2212
opened Sep 30, 2024 by
danli349
createArrowFiles
can't generate "QualityControl" plots
bug
#2211
opened Sep 29, 2024 by
danli349
Problem How to convert archr project into seurat
bug
Something isn't working
#2207
opened Sep 26, 2024 by
A-legac45
can't install ArchR on my mac Sonoma 14.6.1
bug
Something isn't working
#2206
opened Sep 12, 2024 by
yeroslaviz
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