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02.01 Interview Questions
Sherwin Rubio edited this page Nov 22, 2015
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- What are your primary reasons for sharing CT scans of fossils?
- Collaborative research landscape
- International landscape
- Good to have to share and archive.
- You don't want data to be in each persons hard drive.
- Replication is such a big aspect of science
- Losing original data no one can confirm the findings
- Infrastructure to hold all these CT scans
- RAW Image Stacks Primary
- STL Reconstructions (most important) to see anatomical structures
- Don't want it to be public until the STL are vetted
- How are you sharing right now, and with who?
- Currently using Dropbox to share
- Make available to the public
- What is most valuable to you? 3D scans? Metadata?
- Who would be using or accessing this tool, and what are their different roles?
- Internal
- Public
- Why do you need to search CT scans of fossils?
- Collaborative process
- How do you search? By which category? Metadata?
- by species name
- which have multiple entries
- further filtering based on institution, date
- like digimorph
- each folder will have 9 or 10 specimens
- folder named (taxonomic) + Specimen Number
- stacks of images
- VGL files
- STL
- Videos of the specimen
- What are some common problems you've faced with accessing and searching scans?
- Inconsistent data
- What kind of information are you uploading? *.pca file? All the tiffs?
- What do the data requirement variables mean?
- How are all of your files organized currently?
- How do you see this being used in the future? Standards
Step 1: Scanning Image Stacks
- VG Studio
- use TIFF stack to create 3D space Step 2: Export
- STL file Step 3:
- How big are the files
- 1GB-10GB (rare)