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Add chartevents concept mapping #1307

Merged
merged 3 commits into from
Nov 7, 2022
Merged

Add chartevents concept mapping #1307

merged 3 commits into from
Nov 7, 2022

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a-chahin
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@a-chahin a-chahin commented May 25, 2022

This pull request adds two mapping tables for chartevents. The first CSV file meas_chartevents_main contains itemid to omop_concept_id and omop_concept_code for either LOINC or SNOMED depending on the concept. The second CSV meas_chartevents_value file is for values, concepts that do not have an itemid. The values are also mapped to omop_concept_id and omop_concept_code for either LOINC or SNOMED. Mapping codes were reviewed and verified by @xborrat.

@tompollard
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Thanks, looks good to me!

@tompollard tompollard merged commit 8fca62b into main Nov 7, 2022
@tompollard tompollard deleted the chartevents branch November 7, 2022 18:59
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2 participants