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add validate.sql for mimic-iv-note #1687

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merged 1 commit into from
Aug 25, 2024
Merged

add validate.sql for mimic-iv-note #1687

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28 changes: 28 additions & 0 deletions mimic-iv-note/buildmimic/postgres/validate.sql
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Original file line number Diff line number Diff line change
@@ -0,0 +1,28 @@
WITH expected AS
(
SELECT 'discharge' AS tbl, 331793 AS row_count UNION ALL
SELECT 'radiology' AS tbl, 2321355 AS row_count UNION ALL
SELECT 'discharge_detail' AS tbl, 186138 AS row_count UNION ALL
SELECT 'radiology_detail' AS tbl, 6046121 AS row_count
)
, observed as
(
SELECT 'discharge' AS tbl, COUNT(*) AS row_count FROM mimiciv_note.discharge UNION ALL
SELECT 'radiology' AS tbl, COUNT(*) AS row_count FROM mimiciv_note.radiology UNION ALL
SELECT 'discharge_detail' AS tbl, COUNT(*) AS row_count FROM mimiciv_note.discharge_detail UNION ALL
SELECT 'radiology_detail' AS tbl, COUNT(*) AS row_count FROM mimiciv_note.radiology_detail
)
SELECT
exp.tbl
, exp.row_count AS expected_count
, obs.row_count AS observed_count
, CASE
WHEN exp.row_count = obs.row_count
THEN 'PASSED'
ELSE 'FAILED'
END AS ROW_COUNT_CHECK
FROM expected exp
INNER JOIN observed obs
ON exp.tbl = obs.tbl
ORDER BY exp.tbl
;
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