GitHub - ModelDBRepository/244262: Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)

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Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)

modeldb.science/244262

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Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
cells		cells
dat		dat
hoc		hoc
net		net
Iintra.dat.zip		Iintra.dat.zip
alphasyndiffeq.mod		alphasyndiffeq.mod
alphasynkin.mod		alphasynkin.mod
alphasynkint.mod		alphasynkint.mod
ampa.mod		ampa.mod
ar.mod		ar.mod
balanal.hoc		balanal.hoc
balcomp.hoc		balcomp.hoc
cad.mod		cad.mod
cal.mod		cal.mod
cat.mod		cat.mod
cat_a.mod		cat_a.mod
cell_templates.hoc		cell_templates.hoc
clear.hoc		clear.hoc
finit.hoc		finit.hoc
fortmap.hoc		fortmap.hoc
gabaa.mod		gabaa.mod
gidcell.hoc		gidcell.hoc
gidcell.ses		gidcell.ses
iclamp_const.mod		iclamp_const.mod
init_stndbs_4.5hz.hoc		init_stndbs_4.5hz.hoc
k2.mod		k2.mod
ka.mod		ka.mod
ka_ib.mod		ka_ib.mod
kahp.mod		kahp.mod
kahp_deeppyr.mod		kahp_deeppyr.mod
kahp_slower.mod		kahp_slower.mod
kc.mod		kc.mod
kc_fast.mod		kc_fast.mod
kdr.mod		kdr.mod
kdr_fs.mod		kdr_fs.mod
km.mod		km.mod
manage_setup_stndbs_4.5hz.hoc		manage_setup_stndbs_4.5hz.hoc
naf.mod		naf.mod
naf2.mod		naf2.mod
naf_tcr.mod		naf_tcr.mod
nap.mod		nap.mod
napf.mod		napf.mod
napf_spinstell.mod		napf_spinstell.mod
napf_tcr.mod		napf_tcr.mod
onecell.hoc		onecell.hoc
onecell.ses		onecell.ses
par_ggap.mod		par_ggap.mod
perf.dat		perf.dat
prcellstate.hoc		prcellstate.hoc
printcon.hoc		printcon.hoc
pulsesyn.mod		pulsesyn.mod
rampsyn.mod		rampsyn.mod
rand.mod		rand.mod
readme.txt		readme.txt
ri.mod		ri.mod
run_stndbs_4.5hz.q		run_stndbs_4.5hz.q
spkplt.hoc		spkplt.hoc
traub_nmda.mod		traub_nmda.mod
vclampg.hoc		vclampg.hoc
vcompclamp.hoc		vcompclamp.hoc
vcompsim.hoc		vcompsim.hoc

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This is the readme for the model associated with the paper:

Kumaravelu K, Oza CS, Behrend CE, and Grill WM (2018) Model-based Deconstruction
of Cortical Evoked Potentials Generated by Subthalamic Nucleus Deep Brain 
Stimulation. Journal of neurophysiology

The model was run on the Duke Compute Cluster Resource with the
q file - run_stndbs_4.5hz.q


Note: to run, you must first unzip Iintra.dat.zip

---

Edits:
20220519 - zipped Iintra.dat to allow storing on GitHub
20220523 - updated MOD files to contain valid C++ and be compatible
           with the upcoming versions 8.2 and 9.0 of NEURON.
20230420 - updated MOD files for compatibility with the new data
           structures in the upcoming version 9.0 of NEURON.