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@Molmed

Uppsala University, Department of Medical Sciences, Molecular Precision Medicine

Molecular Precision Medicine research group and the SNP&SEQ Technology Platform

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  1. irma-scripts irma-scripts Public

    Stand-alone scripts deployed to Irma

    Python 1 7

Repositories

Showing 10 of 62 repositories
  • seqreports Public

    This is a Nextflow pipeline for generating sequencing reports for the SNP&Seq Technology platform, NGI Uppsala, SciLifelab Genomics.

    Molmed/seqreports’s past year of commit activity
    Python 1 10 0 0 Updated Jan 30, 2025
  • allium_prepro Public

    Tools to preprocess gene expression and DNA methylation data for prediction using the ALLIUM classifier.

    Molmed/allium_prepro’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Jan 15, 2025
  • irma-scripts Public

    Stand-alone scripts deployed to Irma

    Molmed/irma-scripts’s past year of commit activity
    Python 1 7 0 0 Updated Jan 14, 2025
  • ALLCoP Public

    Conformal prediction for acute lymphoblastic leukemia (ALL) RNA-seq classifiers

    Molmed/ALLCoP’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 9, 2024
  • conformist Public

    A conformal prediction framework implementing conformal risk control.

    Molmed/conformist’s past year of commit activity
    Python 2 MIT 0 1 0 Updated Dec 9, 2024
  • allium Public

    ALLIUM modifications for the ALLoy project (a private fork of Krali_2023)

    Molmed/allium’s past year of commit activity
    R 1 MIT 0 0 0 Updated Dec 9, 2024
  • st2-docker Public Forked from matrulda/st2-docker

    StackStorm docker-compose deployment

    Molmed/st2-docker’s past year of commit activity
    Shell 0 Apache-2.0 158 0 0 Updated Nov 27, 2024
  • genologics Public Forked from SciLifeLab/genologics

    Python interface to the GenoLogics LIMS server via its REST API.

    Molmed/genologics’s past year of commit activity
    Python 0 MIT 53 0 2 Updated Nov 25, 2024
  • Equine_Asthma_Cell_Atlas Public

    Analysis scripts for the Equine Asthma Cell Atlas project

    Molmed/Equine_Asthma_Cell_Atlas’s past year of commit activity
    R 0 0 0 0 Updated Nov 22, 2024
  • sis_style_checksums_nextflow Public

    A Nextflow pipeline to generate sisyphus-style checksums

    Molmed/sis_style_checksums_nextflow’s past year of commit activity
    Nextflow 0 MIT 2 0 0 Updated Oct 30, 2024
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