Update GHA workflows to enforce FIMS installation

[Bai-Li-NOAA]

What is the feature?

Update GHA workflows to ensure successful checks on the main branch.

How have you implemented the solution?

• Modify run-googletest.yml and get-gtest-codecov.yml to enforce FIMS installation.
• add PAT to env variable GITHUB_PAT in both run-googletest.yml and get-gtest-codecov.yml

Does the PR impact any other area of the project?

How to test this change

All GHA checks have passed, see details here

Developer pre-PR checklist

• I relied on GitHub actions to 🧪 things for me while I sat on the 🛋️.

[github-actions]

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[github-actions]

Instructions for code reviewer

Hello reviewer, thanks for taking the time to review this PR!

• Please use this checklist during your review, checking off items that you have verified are complete!
• For PRs that don't make changes to code (e.g., changes to README.md or Github actions workflows), feel free to skip over items on the checklist that are not relevant. Remember it is still important to do a thorough review.
• Then, comment on the pull request with your review indicating where you have questions or changes need to be made before merging.
• Remember to review every line of code you’ve been asked to review, look at the context, make sure you’re improving code health, and compliment developers on good things that they do.
• PR reviews are a great way to learn, so feel free to share your tips and tricks. However, for optional changes (i.e., not required for merging), please include nit: (for nitpicking) before making the suggestion. For example, nit: I prefer using a data.frame() instead of a matrix because...
• Engage with the developer when they respond to comments and check off additional boxes as they become complete so the PR can be merged in when all the tasks are fulfilled. Make it clear when this has been reached by commenting on the PR with something like This PR is now ready to be merged, no changes needed.

Checklist

• The PR is requested to be merged into the appropriate branch (typically main)
• The code is well-designed.
• The functionality is good for the users of the code.
• Any User Interface changes are sensible and look good.
• The code isn’t more complex than it needs to be.
• Code coverage remains high, indicating the new code is tested.
• The developer used clear names for everything.
• Comments are clear and useful, and mostly explain why instead of what.
• Code is appropriately documented (doxygen and roxygen).

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

📢 Thoughts on this report? Let us know!.

[k-doering-NOAA]

@Bai-Li-NOAA , thanks for working on this!

Hmm, it looks like these workflows now are only testing code on the main branch, though, which I don't think is what we want? Maybe we need to find a way to specify the branch in the install statement? (I also don't understand the differences between install_github and install_local, and why one works and one doesnt...)

I also wonder if getting rid of the install dependencies step would help; I don't think it is needed if using install_github()

I'm happy to look into options with you to get these working again!

[k-doering-NOAA]

what about using install_local(upgrade= "always", force = TRUE)?

[Bai-Li-NOAA]

@k-doering-NOAA I think install_local(upgrade= "always", force = TRUE) may solve the issue. I will give it a try and let you know!

[github-actions]

Instructions for code reviewer

Hello reviewer, thanks for taking the time to review this PR!

• Please use this checklist during your review, checking off items that you have verified are complete!
• For PRs that don't make changes to code (e.g., changes to README.md or Github actions workflows), feel free to skip over items on the checklist that are not relevant. Remember it is still important to do a thorough review.
• Then, comment on the pull request with your review indicating where you have questions or changes need to be made before merging.
• Remember to review every line of code you’ve been asked to review, look at the context, make sure you’re improving code health, and compliment developers on good things that they do.
• PR reviews are a great way to learn, so feel free to share your tips and tricks. However, for optional changes (i.e., not required for merging), please include nit: (for nitpicking) before making the suggestion. For example, nit: I prefer using a data.frame() instead of a matrix because...
• Engage with the developer when they respond to comments and check off additional boxes as they become complete so the PR can be merged in when all the tasks are fulfilled. Make it clear when this has been reached by commenting on the PR with something like This PR is now ready to be merged, no changes needed.

Checklist

• The PR is requested to be merged into the appropriate branch (typically main)
• The code is well-designed.
• The functionality is good for the users of the code.
• Any User Interface changes are sensible and look good.
• The code isn’t more complex than it needs to be.
• Code coverage remains high, indicating the new code is tested.
• The developer used clear names for everything.
• Comments are clear and useful, and mostly explain why instead of what.
• Code is appropriately documented (doxygen and roxygen).

[k-doering-NOAA]

Looks good now, thanks!