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NextDenovo2.3.0

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@moold moold released this 24 Jun 09:04
· 59 commits to master since this release
  1. Added an extra step to correct structural & base errors after the ctg_graph step.
  2. Re-constructed the algorithm in nextGraph about removing alternative utgs/bubbles/short branches, which will significantly improve the assembly continuity and accuracy, especially for highly heterozygous genomes.
  3. Removed the random_round option.
  4. Optimized the CNS algorithm, slightly improved the corrected seed accuracy.
  5. Add support for python3
  6. Added the assembly quality comparison with Canu, Flye, and Shasta using ONT data from CHM13.
  7. Fixed a few of bugs.
  8. Lots of other small improvements.