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This repository has been archived by the owner on Mar 17, 2021. It is now read-only.

0.6.0

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@dzhoshkun dzhoshkun released this 09 Oct 19:33
· 28 commits to dev since this release
e211b1f

Added

  • isotropic random scaling option
  • volume padding with user-specified constant
  • subpixel layer for superresolution
  • various loss functions for regression (smooth L1 loss, cosine loss etc.)
  • handler for early stopping mechanism
  • aggregator with multiple outputs including labels in CSV
  • nnUNet, an improved version of UNet3D
  • data augmentation with mixup and mixmatch
  • documentation contents
  • demo for learning rate scheduling
  • demo for deep boosted regression
  • initial integration of NiftyReg Resampler
  • initial integration of CSV reader

Fixed

  • issue of loading binary values of NIfTI file
  • various fixes in CI tests
  • prefix name for aggregators
  • various improvements in error messages
  • issue of batch indices in the conditional random field
  • issue of location selection in the weighted sampler
  • model zoo: compatibility upgrade
  • model zoo: new decathlon hippocampus dataset

Changed

  • feature normalisation types options: instance norm, group norm, batch norm
  • convolution with padding option
  • various documentation and docstrings
  • defaulting to remove length one dimensions when saving a 5D volume