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File crawler does not scale for deeply nested directories #78

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aeisenbarth opened this issue Oct 12, 2022 · 1 comment
Closed

File crawler does not scale for deeply nested directories #78

aeisenbarth opened this issue Oct 12, 2022 · 1 comment

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@aeisenbarth
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We have AnnData files stored together with other data which inherently use a deep folder hierarchy (Zarr). The file crawler successfully skips files that are not *.h5ad, but directories not containing h5ad are still rendered. This produces a huge tree.

image

Solutions

  • A possible solution would be to integrate a proper file browser web component that uses step-by-step navigation (progressive disclosure).
  • Keeping the existing file crawler, it would help to also filter directories which have no h5ad as leaf.
    (See Filter directories without h5ad files #77)
alokito pushed a commit to aeisenbarth/cellxgene-gateway that referenced this issue Jul 9, 2023
alokito pushed a commit to aeisenbarth/cellxgene-gateway that referenced this issue Jul 9, 2023
@alokito
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alokito commented Jul 9, 2023

This is deployed to pypi in v0.3.11, please open a new ticket if there are any remaining issues.

@alokito alokito closed this as completed Jul 9, 2023
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