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docs: update dependencies
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Sheng, Caibin committed Aug 1, 2022
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4 changes: 2 additions & 2 deletions docs/requirements.txt
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Expand Up @@ -2,11 +2,11 @@ jinja2<3.1.0
myst_parser
sphinx
nbsphinx
sphinx-gallery==0.10.1
sphinx-gallery
sphinx-argparse
sphinx-disqus
autodocsumm
ipykernel
ipykernel==5.*
protobuf==3.20.*
anndata
scanpy
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2 changes: 1 addition & 1 deletion docs/tutorials/index.rst
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Expand Up @@ -37,7 +37,7 @@ The output folder contains an h5ad file::
output
└── filtered_feature_bc_matrix_denoised_feature_type.h5ad

The h5ad file can be read by `scanpy.read <https://scanpy.readthedocs.io/en/stable/index.html#>`__ as an `anndata <https://anndata.readthedocs.io/en/latest/>`__ object:
The h5ad file can be read by `scanpy.read <https://scanpy.readthedocs.io/en/stable/generated/scanpy.read.html#scanpy.read>`__ as an `anndata <https://anndata.readthedocs.io/en/latest/>`__ object:

- anndata.X, denosed counts.
- anndata.obs['``noise_ratio``'], estimated noise ratio per cell.
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