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Switch all CHEBI URLs to HTTP
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Travis [does not play well with FTP](https://docs.travis-ci.com/user/common-build-problems/#ftpsmtpother-protocol-do-not-work), so this just needed happening.
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@matentzn
matentzn authored Oct 11, 2019
1 parent a3358d5 commit 126bc3f
Showing 1 changed file with 7 additions and 7 deletions.
14 changes: 7 additions & 7 deletions config/chebi.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -4,10 +4,10 @@ idspace: CHEBI
base_url: /obo/chebi

products:
- chebi.owl: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.owl
- chebi.obo: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.obo
- chebi.owl.gz: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.owl.gz
- chebi.obo.gz: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.obo.gz
- chebi.owl: http://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.owl
- chebi.obo: http://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.obo
- chebi.owl.gz: http://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.owl.gz
- chebi.obo.gz: http://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.obo.gz

term_browser: custom

Expand All @@ -19,13 +19,13 @@ entries:
replacement: http://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI%3A24431

- exact: /internal/chebi-disjoints.owl
replacement: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi-disjoints.owl
replacement: http://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi-disjoints.owl

- exact: /internal/chebi-in-bfo.owl
replacement: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi-in-bfo.owl
replacement: http://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi-in-bfo.owl

- exact: /internal/chebi.owl
replacement: ftp://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.owl
replacement: http://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.owl

- prefix: /about/
replacement: http://www.ebi.ac.uk/chebi/searchId.do?chebiId=
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2 comments on commit 126bc3f

@cmungall
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http has stopped working

$ curl -L -s http://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.owl | head
Service Unavailable~/repos/envo/src/envo(Makefile-fixes) $ 

$ curl -L -s ftp://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi.owl | head

<?xml version="1.0"?>
<rdf:RDF xmlns="http://purl.obolibrary.org/obo/chebi.owl#"
     xml:base="http://purl.obolibrary.org/obo/chebi.owl"
     xmlns:chebi1="http://purl.obolibrary.org/obo/chebi#2"
     xmlns:chebi2="http://purl.obolibrary.org/obo/chebi#"
     xmlns:chebi="http://purl.obolibrary.org/obo/chebi/"
     xmlns:chebi3="http://purl.obolibrary.org/obo/chebi#3"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"

@cmungall
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fixed now

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