Resurrect PCI diagnostic for DIII-D Helicon example case

[dlg0]

Summary of status for resurrecting the PCI synthetic diagnostic for DIII-D helicon case.

@cornwalllau placed the most recent runs for here at NERSC ...

/global/project/projectdirs/m77/Lau

One is an ITER case without SOL. The other is a DIII-D run with the SOL.

@nbertell points out there does appear to be a ntilda_e_real variable in the Efield2D.vtk file, which is likely the density variation required for the PCI synthetic diagnostic.

@jcwright77 is going to look for the scripts written by @ntsujii and then will add them to the repo.

Notes from @ntsujii

If you will be using my codes as the basis for doing synthetic PCI,
you will also need to write the part where the toroidal mode number
spectrum is calculated, which is used for summation of all nphi modes.
In addition, if there is any change in the 'fpm' file format since I
have left (there may well be one or two additional variables), this
should be applied to 'aorsaconv.F90' that converts 'fpm' to netcdf
file used in my IDL suite of codes.

[cornwalllau]

There is a third case in the folder DIIID_SPONG_ICE. This is a DIII-D core meant for ion cyclotron emission and I recommend starting with this case as it's easier to work with.

[dlg0]

Tagging participants ...

@AreWeDreaming
@marinoni

[jcwright77]

I've made a branch aorsa/PCI-postprocessing to add documentation, test cases and processing routines associated with the synthetic PCI

[dlg0]

@jcwright77 did you have a build of aorsa on Cori? If so, can you please post the location here.

[cornwalllau]

@dlg0 The test cases in /project/projectdirs/m77/Lau were done on Edison three to four years ago. I just tested one of these cases in Cori using Fred Jaeger's AORSA Cori build in his home folder with reduced number of nodes and grid sizes (it is therefore unphysical). It is located in /global/cscratch1/sd/lauch/DIIID_SPONG_ICE. Let me know if the permissions don't work out.

[jcwright77]

It is at /global/homes/j/jwright/Codes/aorsa/05-08-2014_AORSA_SIMPLE_LOAD_ORBIT_v.24/xaorsa2d.cori =john John C. Wright, Principal Scientist, MIT. 617-253-9612

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[AreWeDreaming]

Hello Everybody,
I have just gotten my NERSC account "denks". Could you please add me to the ACLs of the directories you have listed so far?
Very much appreciate all your help,
Severin

[AreWeDreaming]

Here is the Helicon DIII-D case: /global/project/projectdirs/m77/Lau/DIIID_helicon_parkmurakami_SOL_476MHz_2e18