Skip to content
New issue

Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.

#

By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? # to your account

Jump to bottom

Execute phenotype Bundles #46

Closed
lrasmus opened this issue Feb 24, 2021 · 2 comments
Closed

Execute phenotype Bundles #46

lrasmus opened this issue Feb 24, 2021 · 2 comments
Assignees
@lrasmus

Comments

@lrasmus
Copy link
Member

lrasmus commented Feb 24, 2021

The system should be able to execute phenotypes that are represented as a FHIR Bundle
@lrasmus lrasmus self-assigned this Feb 24, 2021
@psbrandt
Copy link
Member

Another idea is to accept the URL of a Composition resource as input, and then download the full Composition document using the $document operation. That can be a stretch goal though, and either way, we need to be able to evaluate one of these bundles.

@lrasmus
Copy link
Member Author

lrasmus commented Feb 24, 2021

That's a great idea though - and probably easy to extend to once the core Bundle support exists

lrasmus added a commit that referenced this issue Mar 5, 2021
@lrasmus
Execute phenotype FHIR Bundle (#46)
c6e83b9 
Initial support for JSON file-based Bundle only.  Will expand to URL-based later.
lrasmus added a commit that referenced this issue Mar 8, 2021
@lrasmus
Merge pull request #52 from PheMA/execute-bundles
f3f1c70 
Execute phenotype FHIR Bundle (#46)
@lrasmus lrasmus closed this as completed Mar 8, 2021
# for free to join this conversation on GitHub. Already have an account? # to comment
Assignees

@lrasmus lrasmus

Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@psbrandt @lrasmus