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Ancestral k-mer mutation types for SNP data

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RenzoTale88/mutyper

 
 

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A Python package and command line utility for annotating the local ancestral sequence context of biallelic SNPs

build and test Python package

See documentation for install and usage information.

Pairs well with the package mushi, which performs mutation spectrum history inference.

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Ancestral k-mer mutation types for SNP data

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  • Python 89.1%
  • Jupyter Notebook 9.6%
  • Other 1.3%