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@Sentieon

Sentieon

Sentieon's software dramatically improves the performance of bioinformatics tools.

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  1. sentieon-scripts sentieon-scripts Public

    Helper scripts for biological data processing from Sentieon

    Shell 63 21

  2. sentieon-dnaseq sentieon-dnaseq Public archive

    Sentieon DNAseq

    Shell 22 13

  3. hap-eval hap-eval Public

    A VCF comparison engine for structual variant benchmarking

    Python 19 3

  4. sentieon-models sentieon-models Public

    Model files for Sentieon variant callers

    13 2

  5. sentieon-dnascope-ml sentieon-dnascope-ml Public

    Sentieon DNAscope + Machine Learning Model

    Shell 12 4

  6. Sentieon-WDL Sentieon-WDL Public

    WDL pipelines for the Sentieon tools

    WDL 9 3

Repositories

Showing 10 of 16 repositories
  • sentieon-cli Public

    A command-line interface for Sentieon pipelines

    Sentieon/sentieon-cli’s past year of commit activity
    Python 5 BSD-2-Clause 2 0 0 Updated Oct 31, 2024
  • sentieon-scripts Public

    Helper scripts for biological data processing from Sentieon

    Sentieon/sentieon-scripts’s past year of commit activity
    Shell 63 BSD-2-Clause 21 2 0 Updated Oct 23, 2024
  • sentieon-amazon-omics Public

    Sentieon pipelines for AWS HealthOmics

    Sentieon/sentieon-amazon-omics’s past year of commit activity
    WDL 8 BSD-2-Clause 3 0 0 Updated Oct 15, 2024
  • sentieon-models Public

    Model files for Sentieon variant callers

    Sentieon/sentieon-models’s past year of commit activity
    13 2 0 0 Updated Aug 8, 2024
  • terraform Public

    Terraform configuration files for the Sentieon software

    Sentieon/terraform’s past year of commit activity
    HCL 1 BSD-2-Clause 2 0 0 Updated Jul 10, 2024
  • sentieon-docker Public

    Example Dockerfiles for use with the Sentieon software

    Sentieon/sentieon-docker’s past year of commit activity
    Dockerfile 9 BSD-2-Clause 6 0 0 Updated Jul 10, 2024
  • hap-eval Public

    A VCF comparison engine for structual variant benchmarking

    Sentieon/hap-eval’s past year of commit activity
    Python 19 BSD-2-Clause 3 3 0 Updated Apr 10, 2024
  • vcflib Public

    An open-source Python library for parsing and manipulation of VCF

    Sentieon/vcflib’s past year of commit activity
    Python 8 BSD-2-Clause 2 0 0 Updated Apr 9, 2024
  • aws-benchmark-scripts Public

    Scripts used in benchmarking Sentieon DNAseq and DNAscope pipelines on AWS EC2

    Sentieon/aws-benchmark-scripts’s past year of commit activity
    Python 5 3 0 0 Updated Jan 25, 2024
  • sentieon-google-genomics Public

    Run Sentieon pipelines on Google Cloud Platform

    Sentieon/sentieon-google-genomics’s past year of commit activity
    Shell 6 BSD-2-Clause 7 0 0 Updated Aug 28, 2023
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