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@TIO-IKIM

TIO-IKIM

Research Group of Translational Image-guided Oncology (TIO), Institute for Artificial Intelligence in Medicine (IKIM), Essen

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  1. CellViT CellViT Public

    CellViT: Vision Transformers for Precise Cell Segmentation and Classification

    Python 279 50

  2. CellViT-plus-plus CellViT-plus-plus Public

    Python 87 9

  3. CLUE CLUE Public

    CLUE: A Clinical Language Understanding Evaluation for LLMs

    Python 16 3

  4. valuing-vicinity valuing-vicinity Public

    Valuing Vicinity: Memory attention framework for context-based semantic segmentation in histopathology

    Python 9

  5. medical_image_deidentification medical_image_deidentification Public

    De-Identification of Medical Imaging Data: A Comprehensive Tool for Ensuring Patient Privacy

    Python 9 2

  6. k-Strip k-Strip Public

    k-strip: A novel segmentation algorithm in k-space for the application of skull stripping

    Python 6 1

Repositories

Showing 10 of 17 repositories
  • PathoPatcher Public

    PathoPatcher is a Python project designed for accelerating Whole Slide Image Preprocessing, employing AI-based preprocessing techniques with features like annotation handling, color normalization, and configurable parameters

    TIO-IKIM/PathoPatcher’s past year of commit activity
    Python 6 2 1 0 Updated Mar 18, 2025
  • PUMA Public
    TIO-IKIM/PUMA’s past year of commit activity
    Python 0 0 1 0 Updated Mar 18, 2025
  • medical_image_deidentification Public

    De-Identification of Medical Imaging Data: A Comprehensive Tool for Ensuring Patient Privacy

    TIO-IKIM/medical_image_deidentification’s past year of commit activity
    Python 9 MIT 2 0 0 Updated Feb 25, 2025
  • AMD_SemSeg Public
    TIO-IKIM/AMD_SemSeg’s past year of commit activity
    0 MIT 0 0 0 Updated Feb 4, 2025
  • Transfer-learning-across-domain-boundaries Public
    TIO-IKIM/Transfer-learning-across-domain-boundaries’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Feb 4, 2025
  • CLUE Public

    CLUE: A Clinical Language Understanding Evaluation for LLMs

    TIO-IKIM/CLUE’s past year of commit activity
    Python 16 MIT 3 0 0 Updated Jan 22, 2025
  • CellViT-plus-plus Public
    TIO-IKIM/CellViT-plus-plus’s past year of commit activity
    Python 87 9 12 0 Updated Jan 21, 2025
  • TwixMRIAnonymizer Public

    Lightweight anonymization tool for Siemens twix MRI dataformat (.dat)

    TIO-IKIM/TwixMRIAnonymizer’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Jan 21, 2025
  • CellViT Public

    CellViT: Vision Transformers for Precise Cell Segmentation and Classification

    TIO-IKIM/CellViT’s past year of commit activity
    Python 279 50 16 0 Updated Jan 10, 2025
  • k-Strip Public

    k-strip: A novel segmentation algorithm in k-space for the application of skull stripping

    TIO-IKIM/k-Strip’s past year of commit activity
    Python 6 1 0 0 Updated Nov 11, 2024
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