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1. EVCpipeline EVCpipeline Public

   Ensemble Variant Calling is an analysis pipeline that calls somatic variants in a consensus manner from WGS /WES seqencing

   Nextflow

2. RNA-seq_variant-calling RNA-seq_variant-calling Public

   RNA-seq germline variant calling workflow

   Shell 1

3. TCRsequencing TCRsequencing Public

   Bulk TCR sequencing and analysis with MiXCR and Immunarch

   Python 1 1

4. AlexandrovLab/SigProfilerAssignment AlexandrovLab/SigProfilerAssignment Public

   Assignment of known mutational signatures to individual samples and individual somatic mutations

   Python 49 11

5. AlexandrovLab/SigProfilerPlotting AlexandrovLab/SigProfilerPlotting Public

   SigProfilerPlotting provides a standard tool for displaying all types of mutational signatures as well as all types of mutational patterns in cancer genomes. The tool seamlessly integrates with oth…

   Python 46 14