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Co-authored-by: Bob MacCallum <uncoolbob@gmail.com>
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2 changes: 1 addition & 1 deletion
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packages/libs/eda/src/lib/core/components/computations/plugins/correlationAssayMetadata.tsx
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,143 @@ | ||
| import { useQuery } from '@tanstack/react-query'; | ||
| import { Filter, useSubsettingClient } from '../../core'; | ||
| import { usePermissions } from '@veupathdb/study-data-access/lib/data-restriction/permissionsHooks'; | ||
| import { useMemo } from 'react'; | ||
| import { Link } from 'react-router-dom'; | ||
| import { DraggablePanel } from '@veupathdb/coreui/lib/components/containers'; | ||
| import { PanelConfig } from './appState'; | ||
| import { useDebouncedCallback } from '../../core/hooks/debouncing'; | ||
| import Spinner from '@veupathdb/components/lib/components/Spinner'; | ||
| import Banner from '@veupathdb/coreui/lib/components/banners/Banner'; | ||
|
|
||
| interface Props { | ||
| studyId: string; | ||
| /** ID for Studies entity */ | ||
| entityId: string; | ||
| /** ID for StudyID variable */ | ||
| variableId: string; | ||
| filters?: Filter[]; | ||
| panelConfig: PanelConfig; | ||
| updatePanelConfig: (config: PanelConfig) => void; | ||
| hasSelectedMarkers: boolean; | ||
| } | ||
|
|
||
| export function SubStudies(props: Props) { | ||
| // get tabular data for studies | ||
| const { | ||
| entityId, | ||
| studyId, | ||
| variableId, | ||
| filters = [], | ||
| panelConfig, | ||
| updatePanelConfig, | ||
| hasSelectedMarkers, | ||
| } = props; | ||
| const subsettingClient = useSubsettingClient(); | ||
| const permissions = usePermissions(); | ||
| const result = useQuery({ | ||
| queryKey: ['map', 'studies', entityId, filters], | ||
| queryFn: async () => { | ||
| return await subsettingClient.getTabularData(studyId, entityId, { | ||
| filters, | ||
| outputVariableIds: [variableId], | ||
| reportConfig: { | ||
| headerFormat: 'standard', | ||
| }, | ||
| }); | ||
| }, | ||
| }); | ||
|
|
||
| const datasetIdByStudyId = useMemo(() => { | ||
| if (permissions.loading) return {}; | ||
| return Object.fromEntries( | ||
| Object.entries(permissions.permissions.perDataset) | ||
| .map(([datasetId, value]) => [value?.studyId, datasetId]) | ||
| .filter((entry): entry is [string, string] => entry[0] != null) | ||
| ); | ||
| }, [permissions]); | ||
|
|
||
| const updatePosition = useDebouncedCallback( | ||
| (position: PanelConfig['position']) => { | ||
| updatePanelConfig({ ...panelConfig, position }); | ||
| }, | ||
| 250 | ||
| ); | ||
|
|
||
| const updateDimensions = useDebouncedCallback( | ||
| (dimensions: PanelConfig['dimensions']) => { | ||
| updatePanelConfig({ ...panelConfig, dimensions }); | ||
| }, | ||
| 250 | ||
| ); | ||
|
|
||
| return ( | ||
| <DraggablePanel | ||
| isOpen | ||
| confineToParentContainer | ||
| showPanelTitle | ||
| panelTitle="Studies" | ||
| defaultPosition={panelConfig.position} | ||
| onDragComplete={updatePosition} | ||
| onPanelResize={updateDimensions} | ||
| styleOverrides={{ | ||
| zIndex: 10, | ||
| height: panelConfig.dimensions.height, | ||
| width: panelConfig.dimensions.width, | ||
| resize: 'both', | ||
| overflow: 'auto', | ||
| }} | ||
| onPanelDismiss={() => | ||
| updatePanelConfig({ ...panelConfig, isVisble: false }) | ||
| } | ||
| > | ||
| <div | ||
| css={{ | ||
| padding: '1em', | ||
| }} | ||
| > | ||
| {result.error ? ( | ||
| <Banner | ||
| banner={{ | ||
| type: 'error', | ||
| message: String(result.error), | ||
| }} | ||
| /> | ||
| ) : result.data == null || result.isFetching ? ( | ||
| <Spinner /> | ||
| ) : ( | ||
| <div> | ||
| <p> | ||
| There {studyCountPhrase(result.data.length - 1)} for the{' '} | ||
| {hasSelectedMarkers ? 'selected' : 'visible'} markers on the map. | ||
| </p> | ||
| <ul> | ||
| {result.data.slice(1).map(([id, display]) => ( | ||
| <li> | ||
| <Link | ||
| target="_blank" | ||
| to={{ | ||
| pathname: `/record/dataset/${datasetIdByStudyId[id]}`, | ||
| }} | ||
| > | ||
| {display} | ||
| </Link> | ||
| </li> | ||
| ))} | ||
| </ul> | ||
| </div> | ||
| )} | ||
| </div> | ||
| </DraggablePanel> | ||
| ); | ||
| } | ||
|
|
||
| function studyCountPhrase(numStudies: number) { | ||
| switch (numStudies) { | ||
| case 0: | ||
| return 'are no studies'; | ||
| case 1: | ||
| return 'is 1 study'; | ||
| default: | ||
| return `are ${numStudies} studies`; | ||
| } | ||
| } |
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