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LD-amplicon-pipeline-overview

LD lab amplicon analysis

目前扩增子分析流程

曲泽鹏:合成菌群扩增子分析 (vsearch双端合并 + bowtie2(very sensitive))

吴璐 :肠道菌扩增子分析 (vsearch双端合并 + qiime2单端流程)

汤锦辉:肠道菌扩增子分析(qiime2 双端流程)

杜佳阳:培养菌扩增子丰度分析(qiime2)

胡玉灿:肠道菌转座扩增子分析 (vsearch +bowtie2/qiime2(组成分析) + ETsuite(转座子插入分析))

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