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1. PCAone PCAone Public

   Fast, Accurate and Memory-Efficient Principal Component Analysis All in One

   C++ 40 2

2. rwdavies/QUILT rwdavies/QUILT Public

   QUILT: Low coverage whole genome sequence imputation with large reference panels

   R 53 10

3. vcfpp vcfpp Public

   a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.

   C++ 23 3

4. vcfppR vcfppR Public

   The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049

   C 13 2

5. org-tufte org-tufte Public

   Exporting a org file to the beauty Tufte html

   Emacs Lisp 74 2

6. phaseless phaseless Public

   Imputation and Admixture for lcWGS in one goal

   C++ 2