Merge pull request #284 from jorritmesman/main #96
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| # For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag. | |
| # https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| pull_request: | |
| branches: | |
| - main | |
| - master | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: windows-latest, r: 'release'} | |
| - {os: macos-10.15, r: 'release'} | |
| #- {os: ubuntu-16.04, r: '4.0.3', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"} | |
| - {os: ubuntu-18.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| RSPM: ${{ matrix.config.rspm }} | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Codecov | |
| uses: codecov/codecov-action@v1.2.1 | |
| - uses: r-lib/actions/setup-r@v1 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| - uses: r-lib/actions/setup-pandoc@v1 | |
| - name: Query dependencies | |
| run: | | |
| install.packages('remotes') | |
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
| writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | |
| shell: Rscript {0} | |
| - name: Cache R packages | |
| if: runner.os != 'Windows' | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | |
| - name: Install Linux dependencies | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get install libnetcdf-dev libnetcdff-dev | |
| sudo apt-get install libgfortran3 | |
| sudo apt-get install libc6 | |
| sudo apt-get install libxml2-dev | |
| sudo apt-get install kst | |
| while read -r cmd | |
| do | |
| eval sudo $cmd | |
| done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "18.04"))') | |
| - name: Install macOS dependencies | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew install netcdf | |
| - name: Install dependencies | |
| run: | | |
| remotes::install_deps(dependencies = TRUE) | |
| remotes::install_cran("rcmdcheck") | |
| remotes::install_cran("xtable") | |
| remotes::install_cran("gstat") | |
| remotes::install_github("GLEON/rLakeAnalyzer") | |
| remotes::install_github("aemon-j/GLM3r", ref = "v3.1.1") | |
| remotes::install_github("aemon-j/FLakeR", ref = "inflow") | |
| remotes::install_github("aemon-j/GOTMr") | |
| remotes::install_github("aemon-j/SimstratR") | |
| remotes::install_github("aemon-j/gotmtools") | |
| remotes::install_github("aemon-j/MyLakeR") | |
| remotes::install_github("USGS-R/glmtools", ref = "ggplot_overhaul") | |
| shell: Rscript {0} | |
| - name: Check | |
| env: | |
| _R_CHECK_CRAN_INCOMING_REMOTE_: false | |
| run: | | |
| options(crayon.enabled = TRUE) | |
| rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran", "--no-build-vignettes"), error_on = "error", check_dir = "check") | |
| shell: Rscript {0} | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check |