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fix: update PopPUNK installation branch in CI workflow
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absternator committed Dec 19, 2024
1 parent 77c53f6 commit 6fe21ef
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions .github/workflows/pytest.yml
Original file line number Diff line number Diff line change
Expand Up @@ -89,8 +89,8 @@ jobs:
sudo apt-get install -y '^libxcb.*-dev' libx11-xcb-dev libglu1-mesa-dev libxrender-dev libxi-dev libxkbcommon-dev libxkbcommon-x11-dev
pip install joblib==1.1.0
conda install -c bioconda pp-sketchlib=2.0.0
pip3 install git+https://github.com/bacpop/PopPUNK@vnetwork_relabelling#egg=PopPUNK
# TODO revert above branch
pip3 install git+https://github.com/bacpop/PopPUNK@network_relabelling#egg=PopPUNK
# TODO revert above branch before merge
- name: Install Poetry
uses: snok/install-poetry@v1
with:
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