Merge pull request #13 from bgruening/17.05

update to latest galaxy release

Dockerfile

@@ -1,17 +1,13 @@
 # Galaxy - RNA-Seq
 
-FROM bgruening/galaxy-stable:17.01
+FROM bgruening/galaxy-stable:17.05
 
 MAINTAINER Björn A. Grüning, bjoern.gruening@gmail.com
 
 ENV GALAXY_CONFIG_BRAND NGS-preprocessing
-ENV ENABLE_TTS_INSTALL True
-
-# Enable Conda dependency resolution
-ENV GALAXY_CONFIG_CONDA_AUTO_INSTALL=True \
-    GALAXY_CONFIG_CONDA_AUTO_INIT=True
 
 # Install tools
-ADD ngs_preprocessing.yml $GALAXY_ROOT/tools.yaml
+COPY ngs_preprocessing.yml $GALAXY_ROOT/tools.yaml
+
 RUN install-tools $GALAXY_ROOT/tools.yaml && \
     /tool_deps/_conda/bin/conda clean --tarballs

ngs_preprocessing.yml

@@ -62,10 +62,6 @@ tools:
 - name: data_manager_bwa_mem_index_builder
   owner: devteam
 
-- name: suite_deeptools
-  owner: bgruening
-  tool_panel_section_label: "deepTools"
-
 - name: deeptools_bigwig_compare
   owner: bgruening
   tool_panel_section_label: "deepTools"
@@ -129,7 +125,3 @@ tools:
 - name: bedtools
   owner: iuc
   tool_panel_section_label: "BED Tools"
-
-
-
-