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Popular repositories Loading

  1. read_depth_genotyper read_depth_genotyper Public

    Get genotypes for regions using WSSD and SUNK

    Python 3 2

  2. bwa_mem_mapping bwa_mem_mapping Public

    Fastq to bam mapping pipeline with marked duplicates, indexing, and insert size metric collection

    Python 2

  3. phylo-amp phylo-amp Public

    Assessing model fit using posterior prediction

    Python

  4. conifer_pipeline conifer_pipeline Public

    Scripts for processing data using conifer

    Python

  5. ssf_DTS_caller ssf_DTS_caller Public

    Forked from psudmant/ssf_DTS_caller

    scale space filtering based CNV calling and genotyping

    Python

  6. stream_read_pair stream_read_pair Public

    Forked from psudmant/stream_read_pair

    Python