feat: containerize pipeline's output

boulardlab · Mar 12, 2024 · a3b4086 · a3b4086
1 parent 2d9894c
commit a3b4086
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diff --git a/tests/Dockerfile b/tests/Dockerfile
diff --git a/workflow/Snakefile b/workflow/Snakefile
@@ -31,6 +31,14 @@ configfile: "config/config.yaml"
 include: "rules/common.smk"
 
 
+###########################
+## DEFINE PIPELINE CONTAINER
+###########################
+
+
+containerized: "docker://ftabaro/rna-seq:1.0"
+
+
 #######################
 ## DEFINE VARIABLES
 #######################