fix: edit_condition_file rule

boulardlab · Jul 13, 2023 · adb0a5e · adb0a5e
1 parent b7c238b
commit adb0a5e
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflow/include/salmonTE.smk b/workflow/include/salmonTE.smk
@@ -33,7 +33,7 @@ rule edit_condition_file:
                 )
                 sample_sheet = sample_sheet.set_index("tmp")
             else:
-                sample_sheet = sample_sheet.set_index("filename_1")
+                sample_sheet = sample_sheet.set_index("name")
 
         sample_sheet = sample_sheet.reindex(index=salmon_condition_sheet.index)