[integrators] upgrade gradient function and exponential integrators #725
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# This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: Continuous Integration | |
on: | |
push: | |
branches: | |
- '**' # matches every branch | |
pull_request: | |
branches: | |
- '**' # matches every branch | |
#on: | |
# push: | |
# branches: [ master ] | |
# pull_request: | |
# branches: [ master ] | |
jobs: | |
test_linux: | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: [ "3.9", "3.10", "3.11"] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
python -m pip install flake8 pytest | |
if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi | |
pip uninstall brainpy -y | |
python setup.py install | |
- name: Lint with flake8 | |
run: | | |
# stop the build if there are Python syntax errors or undefined names | |
flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics | |
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
- name: Test with pytest | |
run: | | |
cd brainpy | |
pytest _src/ | |
# test_linux_py37: | |
# runs-on: ubuntu-latest | |
# strategy: | |
# fail-fast: false | |
# matrix: | |
# python-version: ["3.7"] | |
# | |
# steps: | |
# - uses: actions/checkout@v4 | |
# - name: Set up Python ${{ matrix.python-version }} | |
# uses: actions/setup-python@v5 | |
# with: | |
# python-version: ${{ matrix.python-version }} | |
# - name: Install dependencies | |
# run: | | |
# python -m pip install --upgrade pip | |
# python -m pip install flake8 pytest | |
# if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi | |
# pip install jax==0.3.25 | |
# pip install jaxlib==0.3.25 | |
# pip uninstall brainpy -y | |
# python setup.py install | |
# - name: Lint with flake8 | |
# run: | | |
# # stop the build if there are Python syntax errors or undefined names | |
# flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics | |
# # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
# flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
# - name: Test with pytest | |
# run: | | |
# cd examples | |
# pytest ../brainpy/ | |
# | |
test_macos: | |
runs-on: macos-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ["3.9", "3.10", "3.11"] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
python -m pip install flake8 pytest | |
if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi | |
pip uninstall brainpy -y | |
python setup.py install | |
- name: Lint with flake8 | |
run: | | |
# stop the build if there are Python syntax errors or undefined names | |
flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics | |
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
- name: Test with pytest | |
run: | | |
cd brainpy | |
pytest _src/ | |
# test_macos_py37: | |
# runs-on: macos-latest | |
# strategy: | |
# fail-fast: false | |
# matrix: | |
# python-version: [ "3.7" ] | |
# | |
# steps: | |
# - uses: actions/checkout@v4 | |
# - name: Set up Python ${{ matrix.python-version }} | |
# uses: actions/setup-python@v5 | |
# with: | |
# python-version: ${{ matrix.python-version }} | |
# - name: Install dependencies | |
# run: | | |
# python -m pip install --upgrade pip | |
# python -m pip install flake8 pytest | |
# if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi | |
# pip install jax==0.3.25 | |
# pip install jaxlib==0.3.25 | |
# pip uninstall brainpy -y | |
# python setup.py install | |
# - name: Lint with flake8 | |
# run: | | |
# # stop the build if there are Python syntax errors or undefined names | |
# flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics | |
# # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
# flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
# - name: Test with pytest | |
# run: | | |
# cd examples | |
# pytest ../brainpy/ | |
# | |
# test_windows: | |
# runs-on: windows-latest | |
# strategy: | |
# fail-fast: false | |
# matrix: | |
# python-version: ["3.8", "3.9", "3.10", "3.11"] | |
# | |
# steps: | |
# - uses: actions/checkout@v4 | |
# - name: Set up Python ${{ matrix.python-version }} | |
# uses: actions/setup-python@v5 | |
# with: | |
# python-version: ${{ matrix.python-version }} | |
# - name: Install dependencies | |
# run: | | |
# python -m pip install --upgrade pip | |
# python -m pip install flake8 pytest | |
# python -m pip install numpy>=1.21.0 | |
# python -m pip install "jaxlib==0.4.11" -f https://whls.blob.core.windows.net/unstable/index.html --use-deprecated legacy-resolver | |
# python -m pip install jax==0.4.11 | |
# python -m pip install -r requirements-dev.txt | |
# python -m pip install tqdm brainpylib | |
# pip uninstall brainpy -y | |
# python setup.py install | |
# - name: Lint with flake8 | |
# run: | | |
# # stop the build if there are Python syntax errors or undefined names | |
# flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics | |
# # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
# flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
# - name: Test with pytest | |
# run: | | |
# cd brainpy | |
# pytest _src/ | |
# test_windows_py37: | |
# runs-on: windows-latest | |
# strategy: | |
# fail-fast: false | |
# matrix: | |
# python-version: ["3.7"] | |
# | |
# steps: | |
# - uses: actions/checkout@v4 | |
# - name: Set up Python ${{ matrix.python-version }} | |
# uses: actions/setup-python@v5 | |
# with: | |
# python-version: ${{ matrix.python-version }} | |
# - name: Install dependencies | |
# run: | | |
# python -m pip install --upgrade pip | |
# python -m pip install flake8 pytest | |
# python -m pip install numpy>=1.21.0 | |
# python -m pip install "jaxlib==0.3.25" -f https://whls.blob.core.windows.net/unstable/index.html --use-deprecated legacy-resolver | |
# python -m pip install https://github.com/google/jax/archive/refs/tags/jax-v0.3.25.tar.gz | |
# python -m pip install -r requirements-dev.txt | |
# python -m pip install tqdm brainpylib | |
# pip uninstall brainpy -y | |
# python setup.py install | |
# - name: Lint with flake8 | |
# run: | | |
# # stop the build if there are Python syntax errors or undefined names | |
# flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics | |
# # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
# flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
# - name: Test with pytest | |
# run: | | |
# cd examples | |
# pytest ../brainpy/ |