Upgrade htsjdk to v3.0.0.

[cmnbroad]

No description provided.

[gatk-bot]

Github actions tests reported job failures from actions build 2378038203
Failures in the following jobs:

Test Type	JDK	Job ID	Logs
unit	11	2378038203.13	logs
integration	11	2378038203.12	logs
unit	8	2378038203.1	logs
integration	8	2378038203.0	logs

[codecov]

Codecov Report

Merging #7867 (aa45aa8) into master (804d1e2) will increase coverage by 0.011%.
The diff coverage is 80.000%.

@@               Coverage Diff               @@
##              master     #7867       +/-   ##
===============================================
+ Coverage     87.078%   87.089%   +0.011%     
+ Complexity     36997     36993        -4     
===============================================
  Files           2217      2217               
  Lines         173849    173847        -2     
  Branches       18791     18791               
===============================================
+ Hits          151385    151402       +17     
+ Misses         15832     15818       -14     
+ Partials        6632      6627        -5     

Impacted Files	Coverage Δ
...bender/tools/funcotator/StrandCorrectedAllele.java	0.000% <ø> (ø)
...nstitute/hellbender/utils/haplotype/Haplotype.java	90.244% <ø> (ø)
...kers/haplotypecaller/AssemblyBasedCallerUtils.java	90.517% <66.667%> (-0.041%)	⬇️
...itute/hellbender/engine/spark/GATKRegistrator.java	100.000% <100.000%> (ø)
...lbender/tools/sv/cluster/CanonicalSVCollapser.java	87.471% <0.000%> (-0.464%)	⬇️
...itute/hellbender/tools/LocalAssemblerUnitTest.java	92.448% <0.000%> (ø)
.../hellbender/utils/genotyper/AlleleLikelihoods.java	90.349% <0.000%> (+0.205%)	⬆️
...lbender/utils/variant/GATKVariantContextUtils.java	87.224% <0.000%> (+0.232%)	⬆️
...llbender/tools/spark/sv/evidence/ReadMetadata.java	88.480% <0.000%> (+0.245%)	⬆️
...er/tools/spark/sv/evidence/BreakpointEvidence.java	79.206% <0.000%> (+0.467%)	⬆️
... and 12 more

[gatk-bot]

Github actions tests reported job failures from actions build 2378939111
Failures in the following jobs:

Test Type	JDK	Job ID	Logs
cloud	8	2378939111.10	logs

[cmnbroad]

Draft until we have a Picard release with broadinstitute/picard#1812.

[droazen]

@cmnbroad Is this one ready for review?

[cmnbroad]

@droazen Yeah, I had just forgotten to take it out of draft after the Picard update.

[droazen]

👍 Merge when ready @cmnbroad