Code

Add dummy sheet test#28

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gaurav merged 38 commits intodevelopcancerDHC/sheet2linkml:developfrom add-dummy-sheet-testcancerDHC/sheet2linkml:add-dummy-sheet-testCopy head branch name to clipboardDec 10, 2021

+1,024-189

Commits

Commits on Dec 9, 2021

• Updated packages with poetry update.

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  f3ca061

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• Added pytest for testing.

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• Added a test for --help to the command line test.

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• Added check for a missing Google Sheet ID.

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• Added --google-sheet-id as a command line argument.

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• Added check for logging_config before using it.

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• Updated sheet2linkml to explicitly return 0 as an exit code.

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• Added tests for generating a schema from a Google Sheet.

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• Replaced unnecessary print() with logging.debug().

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• Updated TCCM API and invocation.

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• Updated tests in line with CCDH Terminology Service changes.

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• Fixed source code style with black.

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• Add support for a 404 response from the TCCM Terminology Service.

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• Fixed code syntax using black.

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  8ae8e25

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• Updated CHANGELOG.

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• Clarified Poetry installation in GitHub Action.

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  6786b43

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• Updated pytest.yaml to run pytest.

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• Added support for SHEET2LINKML_GOOGLE_SERVICE_ACCT.

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• Updated PyTest to use SHEET2LINKML_GOOGLE_SERVICE_ACCT.

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• Renamed GitHub test and style check workflow.

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• Fixed code style with black.

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• Improved PyTest workflow file.

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• Improved GitHub Action testing workflow.

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• Moved black to a developmental dependency.

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• Attempt to fix PyTest workflow.

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• Printed out stderr to debug GitHub Action workflow issue.

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• Replaced @cached_property with @Property @lru_cache.

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• Updated CHANGELOG.

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• Added explicit maxsize to @lru_cache.

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• Removed unnecessary @lru_cache annotations.

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• Removed unexpected @Property annotation.

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• Recorded change in CHANGELOG.

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• Removed incorrect @Property.

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Commits on Dec 10, 2021

• Fixed some descriptions in pytest.yaml.

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  d34b6e9

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• Added logging.basicConfig() in case of a missing logging config.

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  c6f6e30

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• Replaced exit() with sys.exit().

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• Improved logging.

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• Reformatted code using black.

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