Sourcery Starbot ⭐ refactored curenosm/MeIA #3

SourceryAI · 2023-12-10T17:49:34Z

Thanks for starring sourcery-ai/sourcery ✨ 🌟 ✨

Here's your pull request refactoring your most popular Python repo.

If you want Sourcery to refactor all your Python repos and incoming pull requests install our bot.

Review changes via command line

To manually merge these changes, make sure you're on the develop branch, then run:

git fetch https://github.com/sourcery-ai-bot/MeIA develop
git merge --ff-only FETCH_HEAD
git reset HEAD^

SourceryAI

Due to GitHub API limits, only the first 60 comments can be shown.

SourceryAI · 2023-12-10T17:49:35Z

modulo_2/sesion_1/src/exercise-S1-3-01.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:35Z

modulo_2/sesion_1/src/exercise-S1-3-01.py

-        for i, (train_index, test_index) in enumerate(skf.split(x, y)):
-
+        for train_index, test_index in skf.split(x, y):


Function kfcv refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

Replace unused for index with underscore (for-index-underscore)

SourceryAI · 2023-12-10T17:49:36Z

modulo_2/sesion_1/src/exercise-S1-3-02.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:36Z

modulo_2/sesion_1/src/exercise-S1-3-02.py

-        
+


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Replace unused for index with underscore (for-index-underscore)

Use f-string instead of string concatenation [×3] (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

SourceryAI · 2023-12-10T17:49:36Z

modulo_2/sesion_1/src/utils/modules_pbashivan.py

-    print("Loading data from %s" % (data_file))
+    print(f"Loading data from {data_file}")

    dataMat = scipy.io.loadmat(data_file, mat_dtype=True)
    all_data = np.array(dataMat['features'])
-    
+
    data = np.array(all_data[:,:len(all_data[0])-1])
    labels = np.array(all_data[:,len(all_data[0])-1])
-    
+
    print("Data loading complete. Shape is %r" % (dataMat['features'].shape,))
-    
+


Function load_data refactored with the following changes:

Replace interpolated string formatting with f-string (replace-interpolation-with-fstring)

SourceryAI · 2023-12-10T17:49:37Z

modulo_2/sesion_2/src/utils/modules_pbashivan.py

-    print("Loading data from %s" % (data_file))
+    print(f"Loading data from {data_file}")

    dataMat = scipy.io.loadmat(data_file, mat_dtype=True)
    all_data = np.array(dataMat['features'])
-    
+
    data = np.array(all_data[:,:len(all_data[0])-1])
    labels = np.array(all_data[:,len(all_data[0])-1])
-    
+
    print("Data loading complete. Shape is %r" % (dataMat['features'].shape,))
-    
+


Function load_data refactored with the following changes:

Replace interpolated string formatting with f-string (replace-interpolation-with-fstring)

SourceryAI · 2023-12-10T17:49:37Z

modulo_2/sesion_2/src/utils/modules_pbashivan.py

-    
+
    """
        Module used to load dataset of bashivan et al. 2014.
    """

    # load data pbashivan
-    data, labels = load_data(data_dir + "FeatureMat_timeWin.mat")
+    data, labels = load_data(f"{data_dir}FeatureMat_timeWin.mat")
    print("Original data:",data.shape, labels.shape)
-        
+
    if generate_images:

        # NOTE: Only a 3D projection is proporcionated, then it is not avaliable other
        # records with positions.
-        
+
        #Load locations in 3D
-        locs_orig = scipy.io.loadmat(data_dir+'Neuroscan_locs_orig.mat', mat_dtype=True)
+        locs_orig = scipy.io.loadmat(
+            f'{data_dir}Neuroscan_locs_orig.mat', mat_dtype=True
+        )
        locs3D = locs_orig['A']
-
-        #Convert to 2D
-        locs2D =[]
-        for e in locs3D:
-            locs2D.append(azim_proj(e))
-
+
+        locs2D = [azim_proj(e) for e in locs3D]
        #save in numpy array
        locs2D = np.array(locs2D)
-        
+
        # visualize projection
        if visualize:
            print("No. channels:",locs3D.shape)
-            
+


Function load_bashivan_data refactored with the following changes:

Use f-string instead of string concatenation [×5] (use-fstring-for-concatenation)

Convert for loop into list comprehension (list-comprehension)

This removes the following comments ( why? ):

#Convert to 2D

SourceryAI · 2023-12-10T17:49:37Z

modulo_2/sesion_3/src/exercise-S1-3-01.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:37Z

modulo_2/sesion_3/src/exercise-S1-3-01.py

-        for i, (train_index, test_index) in enumerate(skf.split(x, y)):
-
+        for train_index, test_index in skf.split(x, y):


Function kfcv refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

Replace unused for index with underscore (for-index-underscore)

SourceryAI · 2023-12-10T17:49:37Z

modulo_2/sesion_3/src/exercise-S1-3-02.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:39Z

modulo_2/sesion_3/src/exercise-S1-3-02.py

-        
+


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Replace unused for index with underscore (for-index-underscore)

Use f-string instead of string concatenation [×3] (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

SourceryAI · 2023-12-10T17:49:40Z

modulo_2/sesion_3/src/exercise-S2-2-01.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:40Z

modulo_2/sesion_3/src/exercise-S2-2-01.py

-        
+
    # Extract pairs between indexes and subjects
    fold_pairs = get_subject_indices(subjects)
-    
+
    # Iterate over fold_pairs
    for foldNum, fold in enumerate(fold_pairs):
        print('Beginning fold {0} out of {1}'.format(foldNum+1, len(fold_pairs)))

        # Only Subjects 1, 2 are executed
-        if foldNum + 1 >= 3:# and foldNum + 1 <= 11:
+        if foldNum >= 2:# and foldNum + 1 <= 11:


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Hoist statements out of for/while loops (hoist-statement-from-loop)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

SourceryAI · 2023-12-10T17:49:40Z

modulo_2/sesion_3/src/exercise-S2-2-02.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:40Z

modulo_2/sesion_3/src/exercise-S2-2-02.py

-        
+
    # Extract pairs between indexes and subjects
    fold_pairs = get_subject_indices(subjects)
-    
+
    # Iterate over fold_pairs
    for foldNum, fold in enumerate(fold_pairs):
        print('Beginning fold {0} out of {1}'.format(foldNum+1, len(fold_pairs)))

-	# Only Subjects 1, 2 are executed
-	if foldNum + 1 >= 3:# and foldNum + 1 <= 11:
-	    continue
-
+        if foldNum >= 2:# and foldNum + 1 <= 11:
+            continue
+


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Hoist statements out of for/while loops (hoist-statement-from-loop)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

This removes the following comments ( why? ):

# Only Subjects 1, 2 are executed

SourceryAI · 2023-12-10T17:49:41Z

modulo_2/sesion_4/src/exercise-S2-2-01.py

-        
+
    # Extract pairs between indexes and subjects
    fold_pairs = get_subject_indices(subjects)
-    
+
    # Iterate over fold_pairs
    for foldNum, fold in enumerate(fold_pairs):
        print('Beginning fold {0} out of {1}'.format(foldNum+1, len(fold_pairs)))

        # Only Subjects 1, 2 are executed
-        if foldNum + 1 >= 3:# and foldNum + 1 <= 11:
+        if foldNum >= 2:# and foldNum + 1 <= 11:


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Hoist statements out of for/while loops (hoist-statement-from-loop)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

SourceryAI · 2023-12-10T17:49:41Z

modulo_2/sesion_4/src/exercise-S2-2-02.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:41Z

modulo_2/sesion_4/src/exercise-S2-2-02.py

-        
+
    # Extract pairs between indexes and subjects
    fold_pairs = get_subject_indices(subjects)
-    
+
    # Iterate over fold_pairs
    for foldNum, fold in enumerate(fold_pairs):
        print('Beginning fold {0} out of {1}'.format(foldNum+1, len(fold_pairs)))

-	# Only Subjects 1, 2 are executed
-	if foldNum + 1 >= 3:# and foldNum + 1 <= 11:
-	    continue
-
+        if foldNum >= 2:# and foldNum + 1 <= 11:
+            continue
+


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Hoist statements out of for/while loops (hoist-statement-from-loop)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

This removes the following comments ( why? ):

# Only Subjects 1, 2 are executed

SourceryAI · 2023-12-10T17:49:41Z

modulo_2/sesion_4/src/exercise-S2-2-03.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:41Z

modulo_2/sesion_4/src/exercise-S2-2-03.py

-        
+
    # Extract pairs between indexes and subjects
    fold_pairs = get_subject_indices(subjects)
-    
+
    # Iterate over fold_pairs
    for foldNum, fold in enumerate(fold_pairs):
        print('Beginning fold {0} out of {1}'.format(foldNum+1, len(fold_pairs)))

        # Only Subjects 1, 2 are executed
-        if foldNum + 1 >= 3:# and foldNum + 1 <= 11:
+        if foldNum >= 2:# and foldNum + 1 <= 11:


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

SourceryAI · 2023-12-10T17:49:43Z

modulo_2/sesion_4/src/exercise-S3-1-01.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:43Z

modulo_2/sesion_4/src/exercise-S3-1-01.py

-        
+
    # Extract pairs between indexes and subjects
    fold_pairs = get_subject_indices(subjects)
-    
+
    # Iterate over fold_pairs
    for foldNum, fold in enumerate(fold_pairs):
        print('Beginning fold {0} out of {1}'.format(foldNum+1, len(fold_pairs)))

        # Only Subjects 1 and 2 are executed
-        if foldNum+1 >= 2:# and foldNum+1 <= 11:
+        if foldNum >= 1:# and foldNum+1 <= 11:


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Hoist statements out of for/while loops (hoist-statement-from-loop)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

SourceryAI · 2023-12-10T17:49:44Z

modulo_2/sesion_4/src/exercise-S3-1-02.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:44Z

modulo_2/sesion_4/src/exercise-S3-1-02.py

-        
+
    # Extract pairs between indexes and subjects
    fold_pairs = get_subject_indices(subjects)
-    
+
    # Iterate over fold_pairs
    for foldNum, fold in enumerate(fold_pairs):
        print('Beginning fold {0} out of {1}'.format(foldNum+1, len(fold_pairs)))

-        if foldNum+1 >= 3:# and foldNum+1 <= 11:
+        if foldNum >= 2:# and foldNum+1 <= 11:


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

SourceryAI · 2023-12-10T17:49:44Z

modulo_2/sesion_4/src/models/model_modules.py

-        out = self.fc_out(x)
-
-        return out
+        return self.fc_out(x)


Function Predictor.forward refactored with the following changes:

Inline variable that is immediately returned (inline-immediately-returned-variable)

SourceryAI · 2023-12-10T17:49:45Z

modulo_2/sesion_5/src/exercise-S2-2-03.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:45Z

modulo_2/sesion_5/src/exercise-S2-2-03.py

-        
+
    # Extract pairs between indexes and subjects
    fold_pairs = get_subject_indices(subjects)
-    
+
    # Iterate over fold_pairs
    for foldNum, fold in enumerate(fold_pairs):
        print('Beginning fold {0} out of {1}'.format(foldNum+1, len(fold_pairs)))

        # Only Subjects 1, 2 are executed
-        if foldNum + 1 >= 3:# and foldNum + 1 <= 11:
+        if foldNum >= 2:# and foldNum + 1 <= 11:


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

SourceryAI · 2023-12-10T17:49:45Z

modulo_2/sesion_5/src/exercise-S3-1-01.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

SourceryAI · 2023-12-10T17:49:45Z

modulo_2/sesion_5/src/exercise-S3-1-01.py

-        
+
    # Extract pairs between indexes and subjects
    fold_pairs = get_subject_indices(subjects)
-    
+
    # Iterate over fold_pairs
    for foldNum, fold in enumerate(fold_pairs):
        print('Beginning fold {0} out of {1}'.format(foldNum+1, len(fold_pairs)))

        # Only Subjects 1 and 2 are executed
-        if foldNum+1 >= 2:# and foldNum+1 <= 11:
+        if foldNum >= 1:# and foldNum+1 <= 11:


Function losocv refactored with the following changes:

Simplify numeric comparison (simplify-numeric-comparison)

Hoist statements out of for/while loops (hoist-statement-from-loop)

Use f-string instead of string concatenation (use-fstring-for-concatenation)

Use with when opening file to ensure closure (ensure-file-closed)

SourceryAI · 2023-12-10T17:49:46Z

modulo_2/sesion_5/src/exercise-S3-1-02.py

-        for batch_idx, data in enumerate(test_loader):
+        for data in test_loader:


Function test refactored with the following changes:

Remove unnecessary calls to enumerate when the index is not used (remove-unused-enumerate)

'Refactored by Sourcery'

6193c53

SourceryAI commented Dec 10, 2023

View reviewed changes

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Sourcery Starbot ⭐ refactored curenosm/MeIA #3

Sourcery Starbot ⭐ refactored curenosm/MeIA #3

SourceryAI commented Dec 10, 2023

SourceryAI left a comment

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

SourceryAI Dec 10, 2023

		for batch_idx, data in enumerate(test_loader):
		for data in test_loader:

		for i, (train_index, test_index) in enumerate(skf.split(x, y)):

		for train_index, test_index in skf.split(x, y):

Sourcery Starbot ⭐ refactored curenosm/MeIA #3

Are you sure you want to change the base?

Sourcery Starbot ⭐ refactored curenosm/MeIA #3

Conversation

SourceryAI commented Dec 10, 2023

SourceryAI left a comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment

Choose a reason for hiding this comment