This component of the DBVirus project downloads RNA sequences whose metadata was searched by the Searcher step and saved in a databases through the Caching layer.
- Download _any_ available sequence that wasn't yet downloaded:
dbvirus-downloader --mongo-url=mongodb://server:port/db
- Download a specific sequence if it wasn't yet downloaded
2.1. By UID
dbvirus-downloader <uid> --mongo-url=mongodb://server:port/db dbvirus-downloader 9362723 --mongo-url=mongodb://server:port/db
2.2. By SRA Filename
dbvirus-downloader <filename> --mongo-url=mongodb://server:port/db dbvirus-downloader DRR182531 --mongo-url=mongodb://server:port/db
2.3 By Experiment Accession
dbvirus-downloader <filename> --mongo-url=mongodb://server:port/db dbvirus-downloader DRX173036 --mongo-url=mongodb://server:port/db