GitHub - foriin/Brains.DamID: Scripts for processing DamID-seq and Microarray data in drosophila brains and Kc167 cells

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Scripts for processing DamID-seq and Microarray data in drosophila brains and Kc167 cells

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Name		Name	Last commit message	Last commit date
Latest commit History 8 Commits
Brains.DamID-seq.RNA-chip.R		Brains.DamID-seq.RNA-chip.R
Brains.DamID.Rproj		Brains.DamID.Rproj
DamID.vs.RNAseq.R		DamID.vs.RNAseq.R
DamID.vs.RNAseq.RSEM.R		DamID.vs.RNAseq.RSEM.R
HP1.kd.RNA.ma.Genome2.0Array.R		HP1.kd.RNA.ma.Genome2.0Array.R
Kc.DamID.RNA.MA.R		Kc.DamID.RNA.MA.R
affy.droso.2.r5.gene.coords.R		affy.droso.2.r5.gene.coords.R
cLADs.coords.txt		cLADs.coords.txt
compare.between.hmms.R		compare.between.hmms.R
compare.prots.tiss.R		compare.prots.tiss.R
damid.corplots.R		damid.corplots.R
density.plots.4.HMM.R		density.plots.4.HMM.R
fiddling.w.ma.1.R		fiddling.w.ma.1.R
fiddling.w.ma.2.R		fiddling.w.ma.2.R
ga.content.R		ga.content.R
genes_w_lt0_damid_in_tss.R		genes_w_lt0_damid_in_tss.R
glirnaseq_specific_genes_lam_hp1_pc_enrich.csv		glirnaseq_specific_genes_lam_hp1_pc_enrich.csv
hmms.comp.rmsk.R		hmms.comp.rmsk.R
jac.perm.test.4.HP1.LAM.R		jac.perm.test.4.HP1.LAM.R
ma.rna.tile.parsing.R		ma.rna.tile.parsing.R
neurnaseq_specific_genes_lam_hp1_pc_enrich.csv		neurnaseq_specific_genes_lam_hp1_pc_enrich.csv
neurons_rnaseq_specific_genes.R		neurons_rnaseq_specific_genes.R
plot_damid_tss_vicinity.R		plot_damid_tss_vicinity.R
remove.single.gaps.R		remove.single.gaps.R
siomi.osc.rnaseq.cor.R		siomi.osc.rnaseq.cor.R
specific.genes.in.interdoms.by.exp.glia.csv		specific.genes.in.interdoms.by.exp.glia.csv
specific.genes.in.interdoms.by.exp.neur.csv		specific.genes.in.interdoms.by.exp.neur.csv
ubiq.genes.R		ubiq.genes.R
venn.3.eulerr.R		venn.3.eulerr.R
venn.5.by.prot.R		venn.5.by.prot.R
venn.playground.2.R		venn.playground.2.R
venn.playground.R		venn.playground.R
wilcox.chr.2.R		wilcox.chr.2.R
x.vs.a.hp1.R		x.vs.a.hp1.R
x.vs.a.hp1.tables.R		x.vs.a.hp1.tables.R