Merge pull request yt-project#4807 from yt-project/pre-commit-ci-upda…

…te-config

[pre-commit.ci] pre-commit autoupdate

.pre-commit-config.yaml

@@ -28,7 +28,7 @@ repos:
     - id: check-yaml
 
 -   repo: https://github.com/psf/black-pre-commit-mirror
-    rev: 23.12.1
+    rev: 24.1.1
     hooks:
     - id: black-jupyter
 
@@ -39,7 +39,7 @@ repos:
         additional_dependencies: [black==23.9.1]
 
 - repo: https://github.com/astral-sh/ruff-pre-commit
-  rev: v0.1.9
+  rev: v0.2.0
   hooks:
   - id: ruff
     args: [--fix]

doc/source/cookbook/tests/test_cookbook.py

@@ -8,6 +8,7 @@
       $ sed -e '/where/d' -i nose.cfg setup.cfg
       $ nosetests doc/source/cookbook/tests/test_cookbook.py -P -v
 """
+
 import subprocess
 import sys
 

tests/nose_runner.py

@@ -99,9 +99,11 @@ def generate_tasks_input():
     exclude_answers = [f"--exclude-test={ex}" for ex in exclude_answers]
 
     args = [
-        (item + [f"--xunit-file={item[0]}.xml"], exclusive)
-        if item[0] != "unittests"
-        else (item + ["--xunit-file=unittests.xml"] + exclude_answers, exclusive)
+        (
+            (item + [f"--xunit-file={item[0]}.xml"], exclusive)
+            if item[0] != "unittests"
+            else (item + ["--xunit-file=unittests.xml"] + exclude_answers, exclusive)
+        )
         for item, exclusive in args
     ]
     return args

tests/pytest_runner.py

@@ -6,7 +6,6 @@
 for executing answer tests and optionally generating new answers.
 """
 
-
 import glob
 import os
 

tests/report_failed_answers.py

@@ -4,7 +4,6 @@
 
 """
 
-
 import argparse
 import base64
 import collections

yt/__init__.py

@@ -7,6 +7,7 @@
 * Contribute: https://github.com/yt-project/yt
 
 """
+
 from ._version import __version__, version_info  # isort: skip
 import yt.units as units
 import yt.utilities.physical_constants as physical_constants

yt/data_objects/construction_data_containers.py

@@ -1653,6 +1653,7 @@ class YTSurface(YTSelectionContainer3D):
     ... ]
     >>> surf.export_ply("my_galaxy.ply", bounds=bounds)
     """
+
     _type_name = "surface"
     _con_args = ("data_source", "surface_field", "field_value")
     _container_fields = (

yt/data_objects/static_output.py

@@ -85,9 +85,9 @@
 # to here, and then have it instantiate EnzoDatasets as appropriate.
 
 
-_cached_datasets: MutableMapping[
-    Union[int, str], "Dataset"
-] = weakref.WeakValueDictionary()
+_cached_datasets: MutableMapping[Union[int, str], "Dataset"] = (
+    weakref.WeakValueDictionary()
+)
 
 # we set this global to None as a place holder
 # its actual instantiation is delayed until after yt.__init__

yt/data_objects/time_series.py

@@ -143,6 +143,7 @@ class DatasetSeries:
     ...     SlicePlot(ds, "x", ("gas", "density")).save()
 
     """
+
     # this annotation should really be Optional[Type[Dataset]]
     # but we cannot import the yt.data_objects.static_output.Dataset
     # class here without creating a circular import for now

yt/data_objects/unions.py

@@ -6,8 +6,7 @@
 class Union(ABC):
     @property
     @abstractmethod
-    def _union_type(self) -> str:
-        ...
+    def _union_type(self) -> str: ...
 
     def __init__(self, name, sub_types):
         self.name = name

yt/exthook.py

@@ -18,6 +18,7 @@
     :copyright: (c) 2015 by Armin Ronacher.
     :license: BSD, see LICENSE for more details.
 """
+
 # This source code was originally in flask/exthook.py
 import os
 import sys

yt/fields/magnetic_field.py

@@ -244,9 +244,7 @@ def _mach_alfven(field, data):
         rm_scale = pc.qp.to("C", "SI") ** 3 / (4.0 * np.pi * pc.eps_0)
     else:
         rm_scale = pc.qp**3 / pc.clight
-    rm_scale *= registry.ds.quan(1.0, "rad") / (
-        2.0 * np.pi * pc.me**2 * pc.clight**3
-    )
+    rm_scale *= registry.ds.quan(1.0, "rad") / (2.0 * np.pi * pc.me**2 * pc.clight**3)
     rm_units = registry.ds.quan(1.0, "rad/m**2").units / unit_system["length"]
 
     def _rotation_measure(field, data):

yt/frontends/adaptahop/data_structures.py

@@ -6,7 +6,6 @@
 
 """
 
-
 import os
 import re
 from itertools import product

yt/frontends/adaptahop/definitions.py

@@ -4,6 +4,7 @@
 
 
 """
+
 from typing import Union
 
 from yt.funcs import mylog

yt/frontends/adaptahop/fields.py

@@ -5,6 +5,7 @@
 
 
 """
+
 from yt._typing import KnownFieldsT
 from yt.fields.field_info_container import FieldInfoContainer
 

yt/frontends/adaptahop/io.py

@@ -6,7 +6,6 @@
 
 """
 
-
 from functools import partial
 from operator import attrgetter
 from typing import Union

yt/frontends/amrvac/data_structures.py

@@ -4,6 +4,7 @@
 
 
 """
+
 import os
 import struct
 import warnings

yt/frontends/amrvac/fields.py

@@ -3,7 +3,6 @@
 
 """
 
-
 import functools
 
 import numpy as np

yt/frontends/amrvac/io.py

@@ -4,6 +4,7 @@
 
 
 """
+
 import os
 
 import numpy as np

yt/frontends/artio/data_structures.py

@@ -483,9 +483,7 @@ def _parse_parameter_file(self):
             ]
 
             self.parameters["unit_m"] = self.artio_parameters["mass_unit"][0]
-            self.parameters["unit_t"] = (
-                self.artio_parameters["time_unit"][0] * abox**2
-            )
+            self.parameters["unit_t"] = self.artio_parameters["time_unit"][0] * abox**2
             self.parameters["unit_l"] = self.artio_parameters["length_unit"][0] * abox
 
             if self.artio_parameters["DeltaDC"][0] != 0:

yt/frontends/athena/data_structures.py

@@ -615,10 +615,10 @@ def _parse_parameter_file(self):
         self.omega_matter = 0.0
         self.hubble_constant = 0.0
         self.cosmological_simulation = 0
-        self.parameters["Time"] = self.current_time  # Hardcode time conversion for now.
-        self.parameters[
-            "HydroMethod"
-        ] = 0  # Hardcode for now until field staggering is supported.
+        # Hardcode time conversion for now.
+        self.parameters["Time"] = self.current_time
+        # Hardcode for now until field staggering is supported.
+        self.parameters["HydroMethod"] = 0
         if "gamma" in self.specified_parameters:
             self.parameters["Gamma"] = self.specified_parameters["gamma"]
         else:

yt/frontends/athena_pp/data_structures.py

@@ -241,10 +241,10 @@ def _parse_parameter_file(self):
         self.omega_matter = 0.0
         self.hubble_constant = 0.0
         self.cosmological_simulation = 0
-        self.parameters["Time"] = self.current_time  # Hardcode time conversion for now.
-        self.parameters[
-            "HydroMethod"
-        ] = 0  # Hardcode for now until field staggering is supported.
+        # Hardcode time conversion for now.
+        self.parameters["Time"] = self.current_time
+        # Hardcode for now until field staggering is supported.
+        self.parameters["HydroMethod"] = 0
         if "gamma" in self.specified_parameters:
             self.parameters["Gamma"] = self.specified_parameters["gamma"]
         else:

yt/frontends/cf_radial/data_structures.py

@@ -4,6 +4,7 @@
 
 
 """
+
 import contextlib
 import os
 import weakref

yt/frontends/cf_radial/tests/test_outputs.py

@@ -4,6 +4,7 @@
 
 
 """
+
 import os
 import shutil
 import tempfile

yt/frontends/chimera/fields.py

@@ -4,6 +4,7 @@
 
 
 """
+
 from yt._typing import KnownFieldsT
 from yt.fields.field_info_container import FieldInfoContainer
 

yt/frontends/gdf/data_structures.py

@@ -278,7 +278,8 @@ def _parse_parameter_file(self):
             self.omega_matter = 0.0
             self.hubble_constant = 0.0
             self.cosmological_simulation = 0
-        self.parameters["Time"] = 1.0  # Hardcode time conversion for now.
+        # Hardcode time conversion for now.
+        self.parameters["Time"] = 1.0
         # Hardcode for now until field staggering is supported.
         self.parameters["HydroMethod"] = 0
         self._handle.close()

yt/frontends/gdf/tests/conftest.py

@@ -3,7 +3,6 @@
 Purpose: Contains fixtures for loading data.
 """
 
-
 # Test data
 sedov = "sedov/sedov_tst_0004.h5"
 

yt/frontends/open_pmd/fields.py

@@ -68,9 +68,7 @@ def velocity(field, data):
             momentum = data[ptype, f"particle_momentum_{axis}"]
             mass = data[ptype, "particle_mass"]
             weighting = data[ptype, "particle_weighting"]
-            return momentum / np.sqrt(
-                (mass * weighting) ** 2 + (momentum**2) / (c**2)
-            )
+            return momentum / np.sqrt((mass * weighting) ** 2 + (momentum**2) / (c**2))
 
         return velocity
 

yt/frontends/owls/owls_ion_tables.py

@@ -20,7 +20,6 @@ def h5rd(fname, path, dtype=None):
 
 
 class IonTableSpectrum:
-
     """A class to handle the HM01 spectra in the OWLS ionization tables."""
 
     def __init__(self, ion_file):
@@ -60,7 +59,6 @@ def return_table_GH1_at_z(self, z):
 
 
 class IonTableOWLS:
-
     """A class to handle OWLS ionization tables."""
 
     DELTA_nH = 0.25

yt/frontends/ramses/field_handlers.py

@@ -144,9 +144,8 @@ class FieldFileHandler(abc.ABC, HandlerMixin):
     # These properties are static properties
     ftype: Optional[str] = None  # The name to give to the field type
     fname: Optional[str] = None  # The name of the file(s)
-    attrs: Optional[
-        tuple[tuple[str, int, str], ...]
-    ] = None  # The attributes of the header
+    # The attributes of the header
+    attrs: Optional[tuple[tuple[str, int, str], ...]] = None
     known_fields = None  # A list of tuple containing the field name and its type
     config_field: Optional[str] = None  # Name of the config section (if any)
 

yt/frontends/sph/io.py

@@ -5,6 +5,7 @@
 
 
 """
+
 from yt.utilities.io_handler import BaseParticleIOHandler
 
 

yt/geometry/coordinates/coordinate_handler.py

@@ -158,8 +158,7 @@ def pixelize(
         periodic=True,
         *,
         return_mask: Literal[False],
-    ) -> "np.ndarray[Any, np.dtype[np.float64]]":
-        ...
+    ) -> "np.ndarray[Any, np.dtype[np.float64]]": ...
 
     @overload
     def pixelize(
@@ -175,8 +174,7 @@ def pixelize(
         return_mask: Literal[True],
     ) -> tuple[
         "np.ndarray[Any, np.dtype[np.float64]]", "np.ndarray[Any, np.dtype[np.bool_]]"
-    ]:
-        ...
+    ]: ...
 
     @abc.abstractmethod
     def pixelize(

yt/loaders.py

@@ -2,6 +2,7 @@
 This module gathers all user-facing functions with a `load_` prefix.
 
 """
+
 import atexit
 import os
 import sys

yt/sample_data/api.py

@@ -1,6 +1,7 @@
 """
 This is a collection of helper functions to yt.load_sample
 """
+
 import json
 import re
 import sys