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9 Open 3 Closed
9 Open 3 Closed
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Issues list

SvPileup should ignore reads marked as duplicates
#41 opened Jul 15, 2024 by ameynert
2
@clintval
5
AggregateSvPileup should report the number of reads associated with each position
#39 opened Apr 16, 2024 by msto
Semantic versioning is not followed on development versions
#38 opened Apr 11, 2024 by nh13
Are some "Possible Deletion"s actually intra-contig rearrangements?
#32 opened Dec 29, 2023 by nh13
SvPileup should allow some minimal filtering
#26 opened Sep 28, 2023 by tfenne
1
fgsv should enable easier review in IGV
#25 opened Sep 28, 2023 by tfenne
1
AggregateSvPileup should account for inaccurate split-read breakpoint positions enhancement New feature or request
#13 opened May 24, 2022 by pamelarussell
1
Tools doc symlink broken documentation Improvements or additions to documentation
#12 opened Apr 6, 2022 by nh13
Document running the tools and any bwa mem options documentation Improvements or additions to documentation
#11 opened Apr 6, 2022 by nh13
@clintval
ProTip! What’s not been updated in a month: updated:<2024-12-13.