update landing links

geoepi · Apr 19, 2024 · 7d1850c · 7d1850c
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diff --git a/.Rproj.user/FFAE6732/pcs/source-pane.pper b/.Rproj.user/FFAE6732/pcs/source-pane.pper
@@ -1,3 +1,3 @@
 {
-    "activeTab": 6
+    "activeTab": 5
 }
diff --git a/.Rproj.user/FFAE6732/sources/prop/1487FE94 b/.Rproj.user/FFAE6732/sources/prop/1487FE94
@@ -2,5 +2,10 @@
     "source_window_id": "",
     "Source": "Source",
     "cursorPosition": "2,0",
-    "scrollLine": "0"
+    "scrollLine": "0",
+    "rmdVisualMode": "true",
+    "rmdVisualWrapConfigured": "true",
+    "docOutlineVisible": "1",
+    "rmdVisualCollapsedChunks": "",
+    "rmdVisualModeLocation": "2:0"
 }
diff --git a/.quarto/xref/23844f6f b/.quarto/xref/23844f6f
@@ -1 +1 @@
-{"options":{"chapters":true},"entries":[],"headings":[]}
+{"headings":[],"entries":[],"options":{"chapters":true}}
diff --git a/.quarto/xref/d37314d0 b/.quarto/xref/d37314d0
@@ -1 +1 @@
-{"entries":[],"options":{"chapters":true},"headings":["geoepi-research-group"]}
+{"options":{"chapters":true},"entries":[],"headings":["geoepi-research-group"]}
diff --git a/docs/github_elements.html b/docs/github_elements.html
@@ -132,16 +132,26 @@ <h1 class="quarto-secondary-nav-title"><span class="chapter-number">2</span>&nbs
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="./repo_components.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">Repository Components</span></a>
+  <a href="./repo_components.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">GH Repo Components</span></a>
   </div>
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="./references.html" class="sidebar-item-text sidebar-link">References</a>
+  <a href="./openscifw.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">4</span>&nbsp; <span class="chapter-title">Data Storage (OSF)</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./overleaf.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">5</span>&nbsp; <span class="chapter-title">LaTeX and Overleaf</span></a>
   </div>
 </li>
       </ul>
   </li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./references.html" class="sidebar-item-text sidebar-link">References</a>
+  </div>
+</li>
     </ul>
     </div>
 
@@ -330,7 +340,7 @@ <h1><strong>GitHub Elements</strong></h1>
   </div>
   <div class="nav-page nav-page-next">
       <a href="./repo_components.html" class="pagination-link">
-        <span class="nav-page-text"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">Repository Components</span></span> <i class="bi bi-arrow-right-short"></i>
+        <span class="nav-page-text"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">GH Repo Components</span></span> <i class="bi bi-arrow-right-short"></i>
       </a>
   </div>
 </nav>

diff --git a/docs/index.html b/docs/index.html
@@ -130,7 +130,17 @@ <h1 class="quarto-secondary-nav-title">GeoEpi Notebook</h1>
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="./repo_components.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">GH Repository Components</span></a>
+  <a href="./repo_components.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">GH Repo Components</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./openscifw.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">4</span>&nbsp; <span class="chapter-title">Data Storage (OSF)</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./overleaf.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">5</span>&nbsp; <span class="chapter-title">LaTeX and Overleaf</span></a>
   </div>
 </li>
       </ul>

diff --git a/docs/references.html b/docs/references.html
@@ -49,7 +49,7 @@
 <script src="site_libs/quarto-search/fuse.min.js"></script>
 <script src="site_libs/quarto-search/quarto-search.js"></script>
 <meta name="quarto:offset" content="./">
-<link href="./repo_components.html" rel="prev">
+<link href="./overleaf.html" rel="prev">
 <script src="site_libs/quarto-html/quarto.js"></script>
 <script src="site_libs/quarto-html/popper.min.js"></script>
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
@@ -149,16 +149,26 @@ <h1 class="quarto-secondary-nav-title">References</h1>
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="./repo_components.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">Repository Components</span></a>
+  <a href="./repo_components.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">GH Repo Components</span></a>
   </div>
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="./references.html" class="sidebar-item-text sidebar-link active">References</a>
+  <a href="./openscifw.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">4</span>&nbsp; <span class="chapter-title">Data Storage (OSF)</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./overleaf.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">5</span>&nbsp; <span class="chapter-title">LaTeX and Overleaf</span></a>
   </div>
 </li>
       </ul>
   </li>
+        <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./references.html" class="sidebar-item-text sidebar-link active">References</a>
+  </div>
+</li>
     </ul>
     </div>
 </nav>
@@ -328,8 +338,8 @@ <h1 class="title d-none d-lg-block">References</h1>
 </script>
 <nav class="page-navigation">
   <div class="nav-page nav-page-previous">
-      <a href="./repo_components.html" class="pagination-link">
-        <i class="bi bi-arrow-left-short"></i> <span class="nav-page-text"><span class="chapter-number">3</span>&nbsp; <span class="chapter-title">Repository Components</span></span>
+      <a href="./overleaf.html" class="pagination-link">
+        <i class="bi bi-arrow-left-short"></i> <span class="nav-page-text"><span class="chapter-number">5</span>&nbsp; <span class="chapter-title">LaTeX and Overleaf</span></span>
       </a>          
   </div>
   <div class="nav-page nav-page-next">

diff --git a/docs/site_libs/bootstrap/bootstrap.min.css b/docs/site_libs/bootstrap/bootstrap.min.css
diff --git a/docs/sitemap.xml b/docs/sitemap.xml
@@ -22,7 +22,7 @@
   </url>
   <url>
     <loc>https://github.com/geoepi/index.html</loc>
-    <lastmod>2024-04-19T16:43:09.173Z</lastmod>
+    <lastmod>2024-04-19T16:57:41.567Z</lastmod>
   </url>
   <url>
     <loc>https://github.com/geoepi/intro.html</loc>
@@ -34,7 +34,7 @@
   </url>
   <url>
     <loc>https://github.com/geoepi/references.html</loc>
-    <lastmod>2024-04-19T16:35:55.893Z</lastmod>
+    <lastmod>2024-04-19T16:58:15.648Z</lastmod>
   </url>
   <url>
     <loc>https://github.com/geoepi/summary.html</loc>
@@ -50,7 +50,7 @@
   </url>
   <url>
     <loc>https://github.com/geoepi/github_elements.html</loc>
-    <lastmod>2024-04-19T16:36:12.420Z</lastmod>
+    <lastmod>2024-04-19T16:58:05.546Z</lastmod>
   </url>
   <url>
     <loc>https://github.com/geoepi/repo_components.html</loc>

diff --git a/github_elements.qmd b/github_elements.qmd
@@ -24,36 +24,34 @@ editor_options:
 
 Essential steps in collaborative code development with GitHub
 
-**Element 1: Introduction to GitHub and its Importance in Scientific Computing**  
-  - Overview of GitHub  
-  - Importance of version control in software development  
-  - Role of GitHub in collaborative research and development  
-  - GitHub's impact on reproducibility and transparency in science  
-
-**Element 2: Setting Up and Navigating GitHub**  
-- Creating a GitHub account  
-- Overview of the GitHub interface  
-- Key terminology (repository, branch, commit, pull request, merge, etc.)  
-
-**Element 3: Creating and Cloning Repositories**  
-- Introduction to repositories  
-- How to create a new repository  
-- Initializing a repository with README, .gitignore, and license  
-- Cloning a repository to your local machine  
-
-**Element 4: Branches and Commits**  
-- The concept of branches in version control  
-- Creating and switching between branches  
-- Making changes and committing them to a branch  
-
-**Element 5: Pull Requests and Code Reviews**  
-- The purpose of pull requests in collaborative development  
-- Creating a pull request  
-- Reviewing pull requests from collaborators  
-- Best practices for code reviews  
-
-**Element 6: Merging Pull Requests and Resolving Conflicts**  
-- The merge process
-- Handling merge conflicts  
-- Strategies for successful merges  
-
+**Element 1: Introduction to GitHub and its Importance in Scientific Computing**\
+- Overview of GitHub\
+- Importance of version control in software development\
+- Role of GitHub in collaborative research and development\
+- GitHub's impact on reproducibility and transparency in science
+
+**Element 2: Setting Up and Navigating GitHub**\
+- Creating a GitHub account\
+- Overview of the GitHub interface\
+- Key terminology (repository, branch, commit, pull request, merge, etc.)
+
+**Element 3: Creating and Cloning Repositories**\
+- Introduction to repositories\
+- How to create a new repository\
+- Initializing a repository with README, .gitignore, and license\
+- Cloning a repository to your local machine
+
+**Element 4: Branches and Commits**\
+- The concept of branches in version control\
+- Creating and switching between branches\
+- Making changes and committing them to a branch
+
+**Element 5: Pull Requests and Code Reviews**\
+- The purpose of pull requests in collaborative development\
+- Creating a pull request\
+- Reviewing pull requests from collaborators\
+- Best practices for code reviews
+
+**Element 6: Merging Pull Requests and Resolving Conflicts**\
+- The merge process - Handling merge conflicts\
+- Strategies for successful merges
Original file line number	Diff line number	Diff line change
		@@ -1 +1 @@
		{"options":{"chapters":true},"entries":[],"headings":[]}
		{"headings":[],"entries":[],"options":{"chapters":true}}
Original file line number	Diff line number	Diff line change
		@@ -1 +1 @@
		{"entries":[],"options":{"chapters":true},"headings":["geoepi-research-group"]}
		{"options":{"chapters":true},"entries":[],"headings":["geoepi-research-group"]}