minor summary change

hasindu2008 · Apr 2, 2023 · f4c3aaf · f4c3aaf
1 parent 64599c5
commit f4c3aaf
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/src/f5c.c b/src/f5c.c
@@ -1047,8 +1047,9 @@ void output_db(core_t* core, db_t* db) {
                 if(summary_fp != NULL && summary.num_events > 0) {
                     size_t strand_idx = 0;
                     std::string fast5_path_str = core->readbb->get_signal_path(qname);
+                    const char *path = (core->opt.flag & F5C_RD_SLOW5)  ? "slow5" : fast5_path_str.c_str();
                     fprintf(summary_fp, "%ld\t%s\t", (long)(db->read_idx[i]), qname);
-                    fprintf(summary_fp, "%s\t%s\t%s\t",fast5_path_str.c_str(), (core->opt.flag & F5C_RNA) ? "rna" : "dna", strand_idx == 0 ? "template" : "complement" );
+                    fprintf(summary_fp, "%s\t%s\t%s\t",path, (core->opt.flag & F5C_RNA) ? "rna" : "dna", strand_idx == 0 ? "template" : "complement" );
                     fprintf(summary_fp, "%d\t%d\t%d\t%d\t", summary.num_events, summary.num_steps, summary.num_skips, summary.num_stays);
                     fprintf(summary_fp, "%.2lf\t%.3lf\t%.3lf\t%.3lf\t%.3lf\n", summary.sum_duration/(db->sig[i]->sample_rate), scalings.shift, scalings.scale, 0.0, scalings.var);
                 }