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Error messages when trying to visualize my BAM file #1661

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Nabs2000 opened this issue Feb 25, 2025 · 1 comment
Open

Error messages when trying to visualize my BAM file #1661

Nabs2000 opened this issue Feb 25, 2025 · 1 comment

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@Nabs2000
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Nabs2000 commented Feb 25, 2025

Hello,

I am using the IGV desktop version to visualize my aligned pancreatic cancer cell line PacBio reads. I am using version 2.19.1

I am trying to visualize my BAM files, but I am receiving these error messages:

Error #1:

Image

I kept seeing this error messages after clicking "OK", until I saw this one:

Error #2:

Image

Then, I kept seeing more of Error #1 until I saw this:

Error #3

Image

Then, finally, I was seeing some results:

Image

Any help in resolving these messages would be super helpful!

Thank you.

@jrobinso
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The errors indicate that the host (bioshare.bioinformatics.ucdavis.edu) is not supporting "range byte" headers. Perhaps it was an intermittent issue.

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