GitHub - inessmit/mesh_chembl_abstracts: Download MeSH terms associated with abstracts for articles in ChEMBL into Oracle tables.

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Download MeSH terms associated with abstracts for articles in ChEMBL into Oracle tables.

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Name		Name	Last commit message	Last commit date
Latest commit History 4 Commits
README.txt		README.txt
mesh_abstract_functions.ipynb		mesh_abstract_functions.ipynb
mesh_abstract_functions.py		mesh_abstract_functions.py
mesh_abstract_run.ipynb		mesh_abstract_run.ipynb
mesh_abstract_run.py		mesh_abstract_run.py
submit.sh		submit.sh

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Scripts for downloading the MeSH terms assigned by the NCBI to abstracts of articles in ChEMBL. These scripts use the Entrez module from Biopython module which connects to the NCBI  web services. Inserts the downloaded terms into own user area Oracle tables.