Imagej macro for counting the the number of organoids in a brightfield image and measure the area of each object. Added are R scripts to analyze the raw data returned by the ijmacro. Pictures of organoid growth are taken each day, and results are plotted per sample to assess differences in growth rate.
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jrijn/organoid-counter-imagej
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Imagej macro for counting the the number of organoids in a brightfield image and measure the area of each object.
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