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justincbagley authored Dec 14, 2020
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[![Codacy Badge](https://app.codacy.com/project/badge/Grade/5ef81c74f3a34e3ba549e1578ab86721)](https://www.codacy.com/gh/justincbagley/bgc_tools/dashboard?utm_source=github.com&utm_medium=referral&utm_content=justincbagley/bgc_tools&utm_campaign=Badge_Grade) [![License](https://img.shields.io/badge/License-BSD%203--Clause-blue.svg)](https://opensource.org/licenses/BSD-3-Clause)

This is the initial development release of `bgc_tools`, a set of utilities for automating `bgc` (Bayesian genomic cline) file prep, analysis, and results plotting, written and developed by Justin Bagley. This software package aids analyses of hybridization using the `bgc` program (Gompert and Buerkle 2012), which uses MCMC to estimate parameters of the Bayesian genomic cline model from genomic SNP/genotype data. This package is under active development but the release is stable.

## LICENSE

All code within the ```bgc_tools``` repository is available "AS IS" under a generous 3-Clause BSD license. See the [LICENSE](LICENSE) file for more information.
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If you use scripts from this repository as part of your published research, I require that you cite the repository as follows (also see _upcoming_ DOI information):

- Bagley, J.C. 2017. bgc_tools. GitHub repository, Available at: https://github.com/justincbagley/bgc_tools.
- Bagley, J.C. 2020. bgc_tools v0.1.0. GitHub repository, Available at: https://github.com/justincbagley/bgc_tools.

Alternatively, please provide the following link to this software repository in the main text of your manuscript:

- https://github.com/justincbagley/bgc_tools

December 12, 2020
## REFERENCES

- Gompert, Z. and Buerkle, C.A., 2012. bgc: Software for Bayesian estimation of genomic clines. *Molecular Ecology Resources*, 12(6), 1168-1176.

December 14, 2020

Justin C. Bagley, Jacksonville, AL, USA

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