function 'dataptr' not provided by package 'Rcpp'

[mhassan]

I am trying to use dropest on bam files from cellranger. However, I keep getting the following error:
Compiling diagnostic stats:
Reads per chromosome per cell;
Fill exon results
Error: function 'dataptr' not provided by package 'Rcpp'
In addition: Warning message:
In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called 'Rcpp'
Execution halted

I pulled the dropest docker and is executing dropest using singularity.

I am not sure what the problem is since I have confirmed that the 'Rccp' library is available in R. I have used different versions of R and all produce the same error message.

I've read somewhere that this issue was resolved in the latest docker version, but somehow I still get it.
Any suggestions will be appreciated.

[evanbiederstedt]

Error: function 'dataptr' not provided by package 'Rcpp'
In addition: Warning message:
In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called 'Rcpp'

I would recommend re-installing Rcpp.
Try reinstalling Rcpp in the singularity image, and even resave the image with the reinstalled Rcpp.

You might also try installing this package in the image to use: https://github.com/kharchenkolab/dropestr

I'll try to remember to update the Docker images myself. (CC @VPetukhov )