Skip to content

Issues: kharchenkolab/dropEst

New issue

Have a question about this project? # for a free GitHub account to open an issue and contact its maintainers and the community.

#

By clicking “#”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? # to your account

40 Open 92 Closed
40 Open 92 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

ram and threads
#138 opened Feb 18, 2024 by Flu09
1
How are multimapping reads counted?
#136 opened Jul 21, 2023 by rbeagrie
3
list of real barcodes for Drop-seq technology
#135 opened Nov 8, 2022 by ste-depo
1
unable to parse out UMI
#134 opened Sep 6, 2022 by liuyang218622
cmake command error?
#131 opened Jun 21, 2022 by hailingfang
2
Error while loading shared libraries: libbamtools
#130 opened Apr 6, 2022 by amufaamo
1
CMake is looking for BAMTOOLS_ROOT/lib but BAMTOOLS creates lib64
#128 opened Jul 12, 2021 by jjv5
3
Conda install does not include libbamtools
#127 opened Jul 9, 2021 by jjv5
1
Matrices for velocity analysis
#126 opened Jul 6, 2021 by benjytan88
1
Way to integrate multiple files
#125 opened Jun 3, 2021 by jinyoung5484
Wrong output of dropTag in SPLiT-seq mode
#124 opened May 23, 2021 by realzhang
1
RNA velocity using exon matrix as spliced and intron + spanning as unspliced
#123 opened Dec 10, 2020 by sarajimenez
1
Error in CorrectUmiSequenceErrors
#122 opened Dec 5, 2020 by ZHIDIHUAYUAN
wondering about merging steps
#120 opened Oct 18, 2020 by kkamiii
function 'dataptr' not provided by package 'Rcpp'
#115 opened Oct 2, 2020 by mhassan
1
All CBs were filtered
#114 opened Aug 18, 2020 by bettycatherine
6
Add dropestr documentation documentation
#113 opened Aug 17, 2020 by VPetukhov
1
KeyError: "tag 'CB' not present" v3
#112 opened Aug 11, 2020 by kaplinserm
2
Barcode 'AAACCCATCTCCCAAT-1' has wrong length and WARNING: Can't find chromosome 'JH584301.1'
#110 opened Jul 20, 2020 by BeyondMyPast228
3
Feasibility of including deduplicated alignments enhancement
#109 opened Jul 9, 2020 by ijhoskins
1
10X v3 Unable to parse UMI v3
#105 opened Apr 19, 2020 by namitc
4
10x V3 Chemistry bug enhancement v3
#104 opened Mar 17, 2020 by aelias1
2
Parsing of CIGAR bug enhancement
#101 opened Feb 24, 2020 by chlee-tabin
ERROR: unable to parse out UMI in--tried all suggestion mentioned previously v3
#99 opened Dec 24, 2019 by bony45
10x.xml(45): expected = usage
#98 opened Dec 23, 2019 by bony45
1
ProTip! Follow long discussions with comments:>50.