deploy: ffacbff

kojix2 · Sep 19, 2024 · e37932e · e37932e
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diff --git a/Bio.html b/Bio.html
@@ -6,7 +6,7 @@
 <title>
   Module: Bio
 
-    &mdash; Documentation by YARD 0.9.36
+    &mdash; Documentation by YARD 0.9.37
 
 </title>
 
@@ -107,9 +107,9 @@ <h2>Defined Under Namespace</h2>
 </div>
 
       <div id="footer">
-  Generated on Sat Jul 20 16:23:09 2024 by
+  Generated on Thu Sep 19 04:14:36 2024 by
   <a href="https://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.9.36 (ruby-3.3.4).
+  0.9.37 (ruby-3.3.5).
 </div>
 
     </div>

diff --git a/Bio/CGRanges.html b/Bio/CGRanges.html
@@ -6,7 +6,7 @@
 <title>
   Class: Bio::CGRanges
 
-    &mdash; Documentation by YARD 0.9.36
+    &mdash; Documentation by YARD 0.9.37
 
 </title>
 
@@ -617,7 +617,7 @@ <h3 class="signature first" id="add-instance_method">
 static VALUE
 cgranges_add(VALUE self, VALUE rb_ctg, VALUE rb_st, VALUE rb_en, VALUE rb_label)
 {
-  cgranges_t *cr = get_cganges(self);
+  cgranges_t *cr = get_cgranges(self);
   cr_intv_t *intv = NULL;
   char *ctg = NULL;
   int32_t st = 0;
@@ -795,7 +795,7 @@ <h3 class="signature " id="contain-instance_method">
 static VALUE
 cgranges_contain(VALUE self, VALUE rb_ctg, VALUE rb_st, VALUE rb_en)
 {
-  cgranges_t *cr = get_cganges(self);
+  cgranges_t *cr = get_cgranges(self);
   char *ctg = NULL;
   int32_t st = 0;
   int32_t en = 0;
@@ -975,7 +975,7 @@ <h3 class="signature " id="count_contain-instance_method">
 static VALUE
 cgranges_count_contain(VALUE self, VALUE rb_ctg, VALUE rb_st, VALUE rb_en)
 {
-  cgranges_t *cr = get_cganges(self);
+  cgranges_t *cr = get_cgranges(self);
   char *ctg = NULL;
   int32_t st = 0;
   int32_t en = 0;
@@ -1146,7 +1146,7 @@ <h3 class="signature " id="count_overlap-instance_method">
 static VALUE
 cgranges_count_overlap(VALUE self, VALUE rb_ctg, VALUE rb_st, VALUE rb_en)
 {
-  cgranges_t *cr = get_cganges(self);
+  cgranges_t *cr = get_cgranges(self);
   char *ctg = NULL;
   int32_t st = 0;
   int32_t en = 0;
@@ -1658,7 +1658,7 @@ <h3 class="signature " id="index-instance_method">
     return Qnil;
   }
 
-  cgranges_t *cr = get_cganges(self);
+  cgranges_t *cr = get_cgranges(self);
   cr_index(cr);
 
   rb_ivar_set(self, rb_intern(&quot;@indexed&quot;), Qtrue);
@@ -1815,7 +1815,7 @@ <h3 class="signature " id="overlap-instance_method">
 static VALUE
 cgranges_overlap(VALUE self, VALUE rb_ctg, VALUE rb_st, VALUE rb_en)
 {
-  cgranges_t *cr = get_cganges(self);
+  cgranges_t *cr = get_cgranges(self);
   char *ctg = NULL;
   int32_t st = 0;
   int32_t en = 0;
@@ -1864,9 +1864,9 @@ <h3 class="signature " id="overlap-instance_method">
 </div>
 
       <div id="footer">
-  Generated on Sat Jul 20 16:23:09 2024 by
+  Generated on Thu Sep 19 04:14:36 2024 by
   <a href="https://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.9.36 (ruby-3.3.4).
+  0.9.37 (ruby-3.3.5).
 </div>
 
     </div>

diff --git a/Bio/CGRanges/IndexedError.html b/Bio/CGRanges/IndexedError.html
@@ -6,7 +6,7 @@
 <title>
   Exception: Bio::CGRanges::IndexedError
 
-    &mdash; Documentation by YARD 0.9.36
+    &mdash; Documentation by YARD 0.9.37
 
 </title>
 
@@ -114,9 +114,9 @@
 </div>
 
       <div id="footer">
-  Generated on Sat Jul 20 16:23:09 2024 by
+  Generated on Thu Sep 19 04:14:36 2024 by
   <a href="https://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.9.36 (ruby-3.3.4).
+  0.9.37 (ruby-3.3.5).
 </div>
 
     </div>

diff --git a/Bio/CGRanges/NoIndexError.html b/Bio/CGRanges/NoIndexError.html
@@ -6,7 +6,7 @@
 <title>
   Exception: Bio::CGRanges::NoIndexError
 
-    &mdash; Documentation by YARD 0.9.36
+    &mdash; Documentation by YARD 0.9.37
 
 </title>
 
@@ -114,9 +114,9 @@
 </div>
 
       <div id="footer">
-  Generated on Sat Jul 20 16:23:09 2024 by
+  Generated on Thu Sep 19 04:14:36 2024 by
   <a href="https://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.9.36 (ruby-3.3.4).
+  0.9.37 (ruby-3.3.5).
 </div>
 
     </div>

diff --git a/_index.html b/_index.html
@@ -4,7 +4,7 @@
     <meta charset="utf-8">
 <meta name="viewport" content="width=device-width, initial-scale=1.0">
 <title>
-  Documentation by YARD 0.9.36
+  Documentation by YARD 0.9.37
 
 </title>
 
@@ -52,7 +52,7 @@
         <div class="clear"></div>
       </div>
 
-      <div id="content"><h1 class="noborder title">Documentation by YARD 0.9.36</h1>
+      <div id="content"><h1 class="noborder title">Documentation by YARD 0.9.37</h1>
 <div id="listing">
   <h1 class="alphaindex">Alphabetic Index</h1>
 
@@ -142,9 +142,9 @@ <h2>Namespace Listing A-Z</h2>
 </div>
 
       <div id="footer">
-  Generated on Sat Jul 20 16:23:09 2024 by
+  Generated on Thu Sep 19 04:14:35 2024 by
   <a href="https://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.9.36 (ruby-3.3.4).
+  0.9.37 (ruby-3.3.5).
 </div>
 
     </div>

diff --git a/class_list.html b/class_list.html
@@ -1,5 +1,5 @@
 <!DOCTYPE html>
-<html>
+<html >
   <head>
     <meta name="viewport" content="width=device-width, initial-scale=1.0">
     <meta charset="utf-8" />
@@ -38,12 +38,15 @@ <h1 id="full_list_header">Class List</h1>
 
         </div>
 
-        <div id="search">Search: <input type="text" /></div>
+        <div id="search">
+          <label for="search-class">Search:</label>
+          <input id="search-class" type="text" />
+        </div>
       </div>
 
       <ul id="full_list" class="class">
         <li id="object_" class="odd"><div class="item" style="padding-left:30px"><span class='object_link'><a href="top-level-namespace.html" title="Top Level Namespace (root)">Top Level Namespace</a></span></div></li>
-<li id='object_Bio' class='even'><div class='item' style='padding-left:30px'><a class='toggle'></a> <span class='object_link'><a href="Bio.html" title="Bio (module)">Bio</a></span><small class='search_info'>Top Level Namespace</small></div><ul><li id='object_Bio::CGRanges' class='collapsed odd'><div class='item' style='padding-left:45px'><a class='toggle'></a> <span class='object_link'><a href="Bio/CGRanges.html" title="Bio::CGRanges (class)">CGRanges</a></span> &lt; Object<small class='search_info'>Bio</small></div><ul><li id='object_Bio::CGRanges::IndexedError' class='collapsed'><div class='item' style='padding-left:60px'><span class='object_link'><a href="Bio/CGRanges/IndexedError.html" title="Bio::CGRanges::IndexedError (class)">IndexedError</a></span> &lt; StandardError<small class='search_info'>Bio::CGRanges</small></div></li><li id='object_Bio::CGRanges::NoIndexError' class='collapsed'><div class='item' style='padding-left:60px'><span class='object_link'><a href="Bio/CGRanges/NoIndexError.html" title="Bio::CGRanges::NoIndexError (class)">NoIndexError</a></span> &lt; StandardError<small class='search_info'>Bio::CGRanges</small></div></li></ul></li></ul></li>
+<li id='object_Bio' class='even'><div class='item' style='padding-left:30px'><a tabindex='0' class='toggle' role='button' aria-label='Bio child nodes' aria-expanded='false' aria-controls='object_Bio'></a> <span class='object_link'><a href="Bio.html" title="Bio (module)">Bio</a></span><small class='search_info'>Top Level Namespace</small></div><div aria-labelledby='object_Bio'><ul><li id='object_Bio::CGRanges' class='collapsed odd'><div class='item' style='padding-left:45px'><a tabindex='0' class='toggle' role='button' aria-label='CGRanges child nodes' aria-expanded='false' aria-controls='object_Bio::CGRanges'></a> <span class='object_link'><a href="Bio/CGRanges.html" title="Bio::CGRanges (class)">CGRanges</a></span> &lt; Object<small class='search_info'>Bio</small></div><div aria-labelledby='object_Bio::CGRanges'><ul><li id='object_Bio::CGRanges::IndexedError' class='collapsed'><div class='item' style='padding-left:60px'><span class='object_link'><a href="Bio/CGRanges/IndexedError.html" title="Bio::CGRanges::IndexedError (class)">IndexedError</a></span> &lt; StandardError<small class='search_info'>Bio::CGRanges</small></div></li><li id='object_Bio::CGRanges::NoIndexError' class='collapsed'><div class='item' style='padding-left:60px'><span class='object_link'><a href="Bio/CGRanges/NoIndexError.html" title="Bio::CGRanges::NoIndexError (class)">NoIndexError</a></span> &lt; StandardError<small class='search_info'>Bio::CGRanges</small></div></li></ul></div></li></ul></div></li>
 
       </ul>
     </div>

diff --git a/css/full_list.css b/css/full_list.css
@@ -20,8 +20,8 @@ h1 { padding: 12px 10px; padding-bottom: 0; margin: 0; font-size: 1.4em; }
 #content.insearch #noresults { margin-left: 7px; }
 li.collapsed ul { display: none; }
 li a.toggle { cursor: default; position: relative; left: -5px; top: 4px; text-indent: -999px; width: 10px; height: 9px; margin-left: -10px; display: block; float: left; background: url(data:image/png;base64,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) no-repeat bottom left; }
-li.collapsed a.toggle { opacity: 0.5; cursor: default; background-position: top left; }
-li { color: #888; cursor: pointer; }
+li.collapsed a.toggle { cursor: default; background-position: top left; }
+li { color: #666; cursor: pointer; }
 li.deprecated { text-decoration: line-through; font-style: italic; }
 li.odd { background: #f0f0f0; }
 li.even { background: #fafafa; }
@@ -47,7 +47,7 @@ li small { display: block; font-size: 0.8em; }
 li small:before { content: ""; }
 li small:after { content: ""; }
 li small.search_info { display: none; }
-#search { width: 170px; position: static; margin: 3px; margin-left: 10px; font-size: 0.9em; color: #888; padding-left: 0; padding-right: 24px; }
+#search { width: 170px; position: static; margin: 3px; margin-left: 10px; font-size: 0.9em; color: #666; padding-left: 0; padding-right: 24px; }
 #content.insearch #search { background-position: center right; }
 #search input { width: 110px; }
 

diff --git a/css/style.css b/css/style.css
@@ -82,6 +82,11 @@ body {
   #search { display: none; }
 }
 
+@media (max-width: 320px) {
+  body { height: 100%; overflow: hidden; overflow-wrap: break-word; }
+  #main { height: 100%; overflow: auto; }
+}
+
 #main img { max-width: 100%; }
 h1 { font-size: 25px; margin: 1em 0 0.5em; padding-top: 4px; border-top: 1px dotted #d5d5d5; }
 h1.noborder { border-top: 0px; margin-top: 0; padding-top: 4px; }
@@ -106,6 +111,7 @@ h2 small a {
   position: relative;
   padding: 2px 7px;
 }
+a { font-weight: 550; }
 .clear { clear: both; }
 .inline { display: inline; }
 .inline p:first-child { display: inline; }

diff --git a/file.README.html b/file.README.html
@@ -6,7 +6,7 @@
 <title>
   File: README
 
-    &mdash; Documentation by YARD 0.9.36
+    &mdash; Documentation by YARD 0.9.37
 
 </title>
 
@@ -138,9 +138,9 @@ <h2 id="label-License">License</h2>
 </div></div>
 
       <div id="footer">
-  Generated on Sat Jul 20 16:23:09 2024 by
+  Generated on Thu Sep 19 04:14:36 2024 by
   <a href="https://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.9.36 (ruby-3.3.4).
+  0.9.37 (ruby-3.3.5).
 </div>
 
     </div>

diff --git a/file_list.html b/file_list.html
@@ -1,5 +1,5 @@
 <!DOCTYPE html>
-<html>
+<html >
   <head>
     <meta name="viewport" content="width=device-width, initial-scale=1.0">
     <meta charset="utf-8" />
@@ -38,7 +38,10 @@ <h1 id="full_list_header">File List</h1>
 
         </div>
 
-        <div id="search">Search: <input type="text" /></div>
+        <div id="search">
+          <label for="search-class">Search:</label>
+          <input id="search-class" type="text" />
+        </div>
       </div>
 
       <ul id="full_list" class="file">

diff --git a/frames.html b/frames.html
@@ -2,7 +2,7 @@
 <html>
 <head>
   <meta charset="utf-8">
-	<title>Documentation by YARD 0.9.36</title>
+	<title>Documentation by YARD 0.9.37</title>
 </head>
 <script type="text/javascript">
 var mainUrl = 'index.html';

diff --git a/index.html b/index.html
@@ -6,7 +6,7 @@
 <title>
   File: README
 
-    &mdash; Documentation by YARD 0.9.36
+    &mdash; Documentation by YARD 0.9.37
 
 </title>
 
@@ -138,9 +138,9 @@ <h2 id="label-License">License</h2>
 </div></div>
 
       <div id="footer">
-  Generated on Sat Jul 20 16:23:09 2024 by
+  Generated on Thu Sep 19 04:14:36 2024 by
   <a href="https://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.9.36 (ruby-3.3.4).
+  0.9.37 (ruby-3.3.5).
 </div>
 
     </div>