This repository contains version 1 of the "ClinSig" program, a Shiny application developed in RStudio that visualizes clinical variants from the NCBI ClinVar database in a lollipop plot format according to their clinical significance.
How to Use?
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Search ClinVar database for the gene of clinical interest and download all variants as a text file.
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Load required R libraries.
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Run the data_manipulation.R script to select the text file and generate a my_data.csv file.
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Load libraries again and run the Lollipop_plot_shiny.R script.
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In the Shiny app screen, upload the my_data.csv file and click submit to generate an interactive lollipop plot of the variants.