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A directory of my WGCNA work as well as tutorials and PDF's related to how to run WGCN analysesA.

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lacey-conrad/WGCNA-work

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Included in this repo are the original tutorials/files for WGCNA written by Steve Horvath and Peter Langfelder.

Videos for WGCNA:

  1. Weighted Correlation Network Analysis & Systems Biologic Applications by Steve Horvath, UCLA (https://www.youtube.com/watch?v=VKDWMdb9MT4)
  2. Hierarchical Clustering and Dynamic Branch Cutting by Peter Langfelder, UCLA (https://www.youtube.com/watch?v=ohw7_HKOlsk)
  3. Blockwise Consensus Network Analysis (https://www.youtube.com/watch?v=S7rFtZnA21o)
  4. PM Module Preservation Statistics (https://www.youtube.com/watch?v=yZK_LPXs9uM)
  5. Network Analysis Short Course (https://www.youtube.com/playlist?list=PLAv3hOAKTXH1zpvHiXUbxTmzUi-ZL0AR5)

Other WGCNA help:

  1. Wayback machine for Steve Horvath's WGCNA website (https://web.archive.org/web/20230323144343/horvath.genetics.ucla.edu/html/CoexpressionNetwork/Rpackages/WGCNA/)
  2. Jennifer Chang and Siva Chudalayandi's guide on WGCNA (https://bioinformaticsworkbook.org/tutorials/wgcna.html#gsc.tab=0)
  3. Natália Faraj Murad tutorial: (https://rpubs.com/natmurad/WGCNA/)

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A directory of my WGCNA work as well as tutorials and PDF's related to how to run WGCN analysesA.

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