fivepseq v1.0b5 release

lilit-nersisyan released this 16 Jul 23:28

· 12 commits to master since this release

b0532c3

Features

count threshold set on points in triangle plots
codon-motif relative counts (di/tri-codons/peptides)
differential heatmaps added in comparisons
RPM normalization done on downsampled read counts
transcript type specified at input - alternative transcript features possible
(optionally skipped) masking of gene boundaries for codon-specific counts
frame barplot p values showing the maximum p-value
meta peak significance (Poisson bassed) annotations

Improvements

count distribution written as dictionary
changed the size of triangle plot points

Bug fixes

figure titles fixed for geneset plots
codon linechart raw counts bug fixed
python 3 compatibility bugs fixed

Assets 2